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#bedtools

These are public posts tagged with #bedtools. You can interact with them if you have an account anywhere in the fediverse.

Pierre Lindenbaum @yokofakun@genomic.social

https://github.com/quinlan-lab/bedder-rs "bedder-tools 😜 is the next generation of bedtools from aaronquinlan
lab. It's early days, but we think the foundation is solid. We're looking for feedback on the rust code. " via brent_p@twitter #bedtools #rust #bioinformatics

GitHub - quinlan-lab/bedder-rs: an API for intersections of genomic data

an API for intersections of genomic data. Contribute…

github.com
Jul 10, 2023, 17:28 · · 0 · 0
Clément Goubert :verified: @clementgoubert@qoto.org

I ♥️ 🛏️⚒️ !
---
RT @aaronquinlan
It's been a while, but version 2.31.0 of #bedtools is out!

This includes a new "summary" command for basic stats, sanity checks, and QC on interval files.

It also supports gzipped FASTA files. Thanks to @brent_p, @38, @jomarnz for their contributions. https://bedtools.readthedocs.io/en/latest/content/tools/summary.html
https://twitter.com/aaronquinlan/status/1651954456714694656

summary — bedtools 2.31.0 documentation

bedtools.readthedocs.io
Apr 29, 2023, 12:47 · · Moa · 0 · 0
Pierre Lindenbaum @yokofakun@genomic.social

#bedtools 2.31.0 released https://github.com/arq5x/bedtools2/releases/tag/v2.31.0

#bioinformatics

Release bedtools version 2.31.0 · arq5x/bedtools2

Added a new summary tool for sanity checks and basic…

github.com
Apr 28, 2023, 07:26 · · 1 · 0

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