#illumina

Pipeline release! nf-core/demultiplex v1.6.1 - 1.6.1!

Please see the changelog: https://github.com/nf-core/demultiplex/releases/tag/1.6.1

#bases2fastq #bcl2fastq #demultiplexing #elementbiosciences #illumina #nfcore #openscience #nextflow #bioinformatics

https://www.europesays.com/uk/35315/ Illumina and Tempus partner to drive the future of precision medicine through genomic AI innovation #Health #Healthcare #Illumina #Inc. #UK #UnitedKingdom

Pipeline release! nf-core/ampliseq v2.13.0 - Ampliseq Version 2.13.0!

Please see the changelog: https://github.com/nf-core/ampliseq/releases/tag/2.13.0

#16s #18s #ampliconsequencing #edna #illumina #iontorrent #its #metabarcoding #metagenomics #microbiome #pacbio #qiime2 #rrna #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/taxprofiler v1.2.3 - v1.2.3 - Bouncy Basenji Patch!

Please see the changelog: https://github.com/nf-core/taxprofiler/releases/tag/1.2.3

#classification #illumina #longreads #metagenomics #microbiome #nanopore #pathogen #profiling #shotgun #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

"#China announced a ban on Tuesday on imports of genetic sequencers from U.S. medical equipment maker #Illumina, just minutes after U.S. President Donald Trump's additional 10% tariff on Chinese goods took effect."

https://www.reuters.com/business/healthcare-pharmaceuticals/china-bans-imports-illuminas-gene-sequencers-2025-03-04/

Pipeline release! nf-core/demultiplex v1.6.0 - 1.6.0!

Please see the changelog: https://github.com/nf-core/demultiplex/releases/tag/1.6.0

#bases2fastq #bcl2fastq #demultiplexing #elementbiosciences #illumina #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/taxprofiler v1.2.2 - v1.2.2 - Bouncy Basenji Patch!

Please see the changelog: https://github.com/nf-core/taxprofiler/releases/tag/1.2.2

#classification #illumina #longreads #metagenomics #microbiome #nanopore #pathogen #profiling #shotgun #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Running an obsolete OS, on obsolete hardware, configured with obsolete settings.

A widely used DNA sequencer contains several worrying vulnerabilities. The #Illumina iSeq 100 can be “easily” disabled or rigged to produce false results, say researchers.

But it’s only the tip of the iceberg: Many other devices are likely affected. In #SBBlogwatch, we spot the weak link in the supply chain. At @TechstrongGroup⁠’s @SecurityBlvd: https://securityboulevard.com/2025/01/illumina-dna-sequencer-richixbw/?utm_source=richisoc&utm_medium=social&utm_content=richisoc&utm_campaign=richisoc

DATE: January 07, 2025 at 10:31AM
SOURCE: HEALTHCARE INFO SECURITY

Direct article link at end of text block below.

Report: Flaws in #Illumina #iSeq100 #DNASequencer Devices Allows Hacks https://t.co/slyAxVnv0a @eclypsium

Here are any URLs found in the article text:

https://t.co/slyAxVnv0a

Articles can be found by scrolling down the page at https://www.healthcareinfosecurity.com/ under the title "Latest"

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Private, vetted email list for mental health professionals: https://www.clinicians-exchange.org

Healthcare security & privacy posts not related to IT or infosec are at @HIPAABot . Even so, they mix in some infosec with the legal & regulatory information.

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#security #healthcare #doctors #itsecurity #hacking #doxxing #psychotherapy #securitynews #psychotherapist #mentalhealth #psychiatry #hospital #socialwork #datasecurity #webbeacons #cookies #HIPAA #privacy #datanalytics #healthcaresecurity #healthitsecurity #patientrecords @infosec #telehealth #netneutrality #socialengineering

Widely used DNA sequencer still doesn’t enforce Secure Boot - In 2012, an industry-wide coalition of hardware and software makers adopte... - https://arstechnica.com/security/2025/01/widely-used-dna-sequencer-still-doesnt-enforce-secure-boot/ #dnasequencer #secureboot #security #firmware #illumina #iseq100 #biz&it

#Illumina #Laxenburg #Austria

Pipeline release! nf-core/demultiplex v1.5.4 - 1.5.4 - 2024-12-10!

Please see the changelog: https://github.com/nf-core/demultiplex/releases/tag/1.5.4

#bases2fastq #bcl2fastq #demultiplexing #elementbiosciences #illumina #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/taxprofiler v1.2.1 - v1.2.1 - Bouncy Basenji Patch [2024-11-28]!

Please see the changelog: https://github.com/nf-core/taxprofiler/releases/tag/1.2.1

#classification #illumina #longreads #metagenomics #microbiome #nanopore #pathogen #profiling #shotgun #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Was unaware #Illumina had provided an open source version of their DRAGEN mapper. Not sure I need to invest exploring it ATM, unless others have positive experiences.

#bioinformatics #genomics

https://github.com/Illumina/DRAGMAP

Pipeline release! nf-core/ampliseq v2.12.0 - Ampliseq Version 2.12.0!

Please see the changelog: https://github.com/nf-core/ampliseq/releases/tag/2.12.0

#16s #18s #ampliconsequencing #edna #illumina #iontorrent #its #metabarcoding #metagenomics #microbiome #pacbio #qiime2 #rrna #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics

Pipeline release! nf-core/demultiplex v1.5.3 - 1.5.3 - 2024-11-06!

Please see the changelog: https://github.com/nf-core/demultiplex/releases/tag/1.5.3

#bases2fastq #bcl2fastq #demultiplexing #elementbiosciences #illumina #nfcore #openscience #nextflow #bioinformatics

New study reshapes our understanding of P-bodies as active participants in RNA regulation, not just storage! We collaborated with the laboratoire de Biologie du Développement from @Sorbonne Université by constructing the libraries and performing #illumina sequencing from human cell lines
https://doi.org/10.1101/2024.04.16.589748

Pipeline release! nf-core/demultiplex v1.5.2 - 1.5.2!

Please see the changelog: https://github.com/nf-core/demultiplex/releases/tag/1.5.2

#bases2fastq #bcl2fastq #demultiplexing #elementbiosciences #illumina #nfcore #openscience #nextflow #bioinformatics

New transcriptomic study demonstrates Decitabine as potential antiviral compound against equine rhinopneumonitis! With our collaborators BioTargen, we performed #illumina sequencing and RNA-seq analysis from horse samples.
https://doi.org/10.3390/v16050746

EU’s ability to challenge ‘killer acquisitions’ dealt a blow by Europe’s highest court https://www.euractiv.com/section/health-consumers/news/eus-ability-to-challenge-killer-acquisitions-dealt-a-blow-by-europes-highest-court/?utm_source=dlvr.it&utm_medium=mastodon #Grail #Illumina #mergers #pharmaceuticals