LinkML (OLD ACCOUNT) @linkml@qoto.org

This profile is about to move to fosstodon.org, stay tuned....!

The next LinkML Community meeting will be on Thursday, October 19 at 8am PT / 11am ET / 15:00 UTC.

Topics:
- Very quick Intro to Arrays use case: Chris Mungall
- N-Dimensional Arrays in LinkML: Ryan Ly
- LLMs and LinkML: J. Harry Caufield

For agenda and Zoom link, please join our mailing list (https://groups.google.com/g/linkml-community) and/or our LinkML Community Slack channel (https://obo-communitygroup.slack.com/?redir=%2Farchives%2FC04EU7JL1NF%3Fname%3DC04EU7JL1NF)

The video of Sierra Moxon's ISCBacademy webinar (LinkML: an open data modeling framework, grounded with ontologies) is now up at https://youtube.com/watch?v=nyNp09WYLzw and the slides are at https://docs.google.com/presentation/d/1elqZxqtQeVzRUiBlmxnyzPhcE4OgOoKoPCaKH_z2d3g/edit#slide=id.g1d28fec4213_0_150

Don't miss the joint BOSC/Bio-Ontologies ISCBacademy webinar tomorrow Oct 3 at 8am PDT (15:00 UTC). @sierramoxon will speak about “LinkML: an open data modeling framework, grounded with ontologies”.
Free, but you need to register for the ISCB's Nucleus platform: https://iscb.swoogo.com/ISCBnucleus-registration
More info: https://www.open-bio.org/2023/09/18/iscbacademy-webinar-oct-3/
#ontologies #datamodeling #FAIRdata

Using Ontologies in Practice: LinkML can help!

Most researchers have heard of ontologies, but that may be where their familiarity ends. What exactly are ontologies, and how are they used in practice? What do you gain by using ontologies? What tools and frameworks can help you leverage ontologies for better data modeling? (SPOILER: LinkML!)

If you’re curious about how LinkML can help you create better, FAIRer, more reusable data models using ontologies, please check out our new article in the OBOOK:
https://oboacademy.github.io/obook/lesson/linkml-helps-with-ontology-use/

The OBOOK (Open Biological and Biomedical Ontologies Organized Knowledge) is a growing collection of documentation, tutorials, and how-to guides for those who are interested in semantic engineering, particularly in biological or biomedical domains. Produced by the OBO Academy, the OBOOK is a free, open, community-focused resource intended to provide ongoing training on best practices in ontology development and use for curators, software developers, and more.

Join our new #LinkML group on LinkedIn! https://www.linkedin.com/groups/14303246/

LinkML Community meeting tomorrow (Thursday, Aug 17) at 8am PT / 11am ET / 15:00 UTC - please join us!
Host: Patrick Kalita
Community presentation: Dorota Jarecka, BICAN knowledge base
Agenda: https://bit.ly/linkml-community-agenda

Hello all!

This account is for the LinkML project. LinkML is an open #DataModeling framework that allows you to easily add #semantics to your data. It can be used to build #DataStandards and #DataDistionaries that are linked to #Ontologies.

The LinkML framework also comes with a number of tools for a range of activities, from generating code (primarily #python), and interchanging between #JSON/#YAML, #RDF, and #RelationalDatabases.

You can find a guide to LinkML here https://linkml.io/linkml, and our main #GitHub repo is here: https://github.com/linkml/linkml

We are a friendly and welcoming community, join us!