#Kilosort

Spike sorting with #Kilosort in #python w/ #pytorch + @pyqtgraph
!
>>> pip install kilosort[gui]

To learn more, check out the paper (https://www.nature.com/articles/s41592-024-02232-7), the docs (https://kilosort.readthedocs.io/en/latest/ by Jacob Pennington), or watch the talk (https://youtube.com/watch?v=LTSmoACr918 by @marius10p )

Is anyone in the neuroscience field using kilosort 3 through spike interface for spike sorting available to help me with some issues/questions? I am currently trying to set up a pipeline using SpikeInterface but am running through some issues. #spikeinterface #kilosort #spikesorting #mountainsort #neuroscience #Python #programming

Using simulated data with known ground truth spike times, we used #Kilosort 2.5 to evaluate spike sorting performance. WavPack Hybrid does not affect spike sorting accuracy, even at maximum compression levels (~14% file size).

(6/n)

2/
Here are some interesting tables from it...
I wonder how well it works with #Tetrodes and in the #Hippocampus given the special shape of #ComplexSpikes ​

If you try it please let us know what you think!!

#Kilosort #Electrophysiology #SpikeSorting
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Looks like #Kilosort 4 is out!
https://www.biorxiv.org/content/10.1101/2023.01.07.523036v1

If you're doing spike-sorting for your research... are you going to try it out?

#Electrophysiology #SpikeSorting
1/ some screenshots below