AI4Life @AI4Life@qoto.org

(2/3) from community partner tools (@BiaPyX, @ilastik_team, deepIcy, @deepImageJ)

Once the #AI models are uploaded to @bioimageio, how can they be used? 3⃣ options are showcased:
(1/3) from the web interface

Tomaz Vieira, Mehdi Seifi and Fynn Beuttenmueller start with the 1st Demo: How can the bioimage.io users create and upload models today via a user-friendly web interface and via API?

@florianjug and Anna Kreshuk now give an overview of all the accomplishments of the project in the past 2 years, looking forward to hearing more in the demos and updates from the project partners!

The AI4Life General Assembly starts with John Eriksson, Director General of @EuroBioImaging giving perspective on how AI4Life fits into the European Research Area

Is it just me, or did the #AI4Life Hackathon in Milan just double the brainpower? 👯‍♂️ #SeeingDouble #TechMagic

Now gearing up for the General Assembly starting on Monday! 🚀

🏆 The AI4Life Denoising Challenge has officially ended! Check out the results and winning algorithms tackling 4 different microscopy noise problems. Congrats to all the participants for their contributions! Read more here:

https://ai4life.eurobioimaging.eu/ai4life-denoising-challenge-2024-results/

Your opinion matters! Help us improve BioImage Model Zoo by sharing your feedback in this short survey:

📝 https://forms.gle/CA1yK4pUKMqBPtso8

Join us in making Bioimage.io the best it can be!

🏆 The wait is over! AI4Life’s 2nd Open Call saw 51 fantastic applications, and now 7 projects are selected for Deep Learning support! Congrats to all selected and thanks to everyone who applied! 🙌
https://ai4life.eurobioimaging.eu/second-ai4life-open-call-announcement-of-selected-projects/

🎥 Discover what #AI4Life is and its impact on the field of #AI and #Bioimaging through the eyes of Joran Deschamps from @humantechnopole; and Craig Russell from @emblebi

https://ai4life.eurobioimaging.eu/interviews-joran-craig/

🎥 We've interviewed Joanna Hård, CEO of Amun AI, a startup from KTH, who shares insights on their Hypha platform and the synergy with AI4Life: https://ai4life.eurobioimaging.eu/interview-amun-ai/

Curious about the organization of AI4Life? Find out how the project is structured and discover who's guiding it by visiting our new Governance page: https://ai4life.eurobioimaging.eu/governance/

🚀 The AI4Life Denoising Challenge is now open for submissions!
🔍 Explore different datasets and showcase your skills in image denoising by competing on any of the four leaderboards: 2 on structured and 2 on unstructured noise.
📥 Submit by June 10th!

📢 Free registration is open for the Workshop & Uploathon hosted by AI4Life! Learn everything about AI-driven microscopy image analysis from top experts in the field.
🗓️ June 10-14
📍 Universidad Carlos III de Madrid
⏳ Register before May 26: https://ai4life.eurobioimaging.eu/event/workshop-hackathon-uploathon-madrid/

After a day and a half of #ImageAnalysis in the cloud with #dask by the IDR team, Damian Dalle Nogare takes over a practical session to apply several #AI models for cell segmentation using #Cellpose

Day 3 wraps up with a technical session by Craig Russell, exploring the core concepts of #NeuralNetworks and applying them in practice with PyTorch.

Check out the tutorial: https://github.com/ctr26/pytorch_tutorial

@gomez_mariscal leads a practical session, demonstrating segmentation using StarDist running locally using #DL4MicEverywhere and @Docker

Wei Ouyang has introduced the ecosystem built around @bioimageio within AI4Life, including Hypha, BioEngine, the @bioimageio ChatBot... at the Microscopy data analysis@EBItraining course

Dominik Kutra from the ilastik team is guiding a practical session on using ilastik for #ImageAnalysis tasks during the EBI course microscopy data analysis. His top tip: For any #ImageAnalysis questions, be sure to check out image.sc! 🖥️🔬

Day 3 of the EBI training virtual course "Microscopy data analysis: ML and the BioImage Archive" is dedicated to AI4Life 🦒. We start with Anna Kreshuk lecturing on Ilastik and bioimage.io. She highlights the need to have a shared format for models understood by all tools