arXiv Quantitative Biology @arxiv_bio@qoto.org

The Physics of Self-Rolling Viruses. (arXiv:2111.08298v1 [cond-mat.soft]) http://arxiv.org/abs/2111.08298

Simulating long-term impacts of mortality shocks: learning from the cholera pandemic. (arXiv:2111.08338v1 [q-bio.PE]) http://arxiv.org/abs/2111.08338

A paradigm shift, or a paradigm adjustment? The Oleaceae mating system as a Kuhnian case-study from evolutionary biology. (arXiv:2111.08417v1 [q-bio.PE]) http://arxiv.org/abs/2111.08417

Code-free development and deployment of deep segmentation models for digital pathology. (arXiv:2111.08430v1 [q-bio.QM]) http://arxiv.org/abs/2111.08430

The structure of gene-gene networks beyond pairwise interactions. (arXiv:2111.08436v1 [q-bio.MN]) http://arxiv.org/abs/2111.08436

On minimizers and convolutional filters: a partial justification for the unreasonable effectiveness of CNNs in categorical sequence analysis. (arXiv:2111.08452v1 [cs.LG]) http://arxiv.org/abs/2111.08452

Analysis of chronic diseases progression using stochastic modeling. (arXiv:2111.06892v1 [q-bio.OT]) http://arxiv.org/abs/2111.06892

Neural optimal feedback control with local learning rules. (arXiv:2111.06920v1 [q-bio.NC]) http://arxiv.org/abs/2111.06920

Computing with Cognitive States. (arXiv:2111.06969v1 [q-bio.NC]) http://arxiv.org/abs/2111.06969

Neural Population Geometry Reveals the Role of Stochasticity in Robust Perception. (arXiv:2111.06979v1 [q-bio.NC]) http://arxiv.org/abs/2111.06979

Quasifibrations of Graphs to Find Symmetries in Biological Networks. (arXiv:2111.06999v1 [q-bio.QM]) http://arxiv.org/abs/2111.06999

Interpreting BERT architecture predictions for peptide presentation by MHC class I proteins. (arXiv:2111.07137v1 [q-bio.QM]) http://arxiv.org/abs/2111.07137

Life-History traits and the replicator equation. (arXiv:2111.07146v1 [q-bio.PE]) http://arxiv.org/abs/2111.07146

Predicting the Directional Transport of Multivalent Cargo from Position Dependent Binding and Unbinding Rates. (arXiv:2111.07200v1 [q-bio.SC]) http://arxiv.org/abs/2111.07200

A rule-based epidemiological framework for modelling and simulation in the context of the covid-19 pandemic. (arXiv:2111.07336v1 [q-bio.PE]) http://arxiv.org/abs/2111.07336

Improving Compound Activity Classification via Deep Transfer and Representation Learning. (arXiv:2111.07439v1 [cs.LG]) http://arxiv.org/abs/2111.07439

Multiple Hypothesis Hypergraph Tracking for Posture Identification in Embryonic Caenorhabditis elegans. (arXiv:2111.06425v1 [eess.IV]) http://arxiv.org/abs/2111.06425

Global and local epidemiology of Group A Streptococcus indicates that naturally-acquired immunity is enduring and strain-specific. (arXiv:2111.06498v1 [q-bio.PE]) http://arxiv.org/abs/2111.06498

Phase Response Curves and the Role of Coordinates. (arXiv:2111.06511v1 [q-bio.QM]) http://arxiv.org/abs/2111.06511

Greater than the parts: A review of the information decomposition approach to causal emergence. (arXiv:2111.06518v1 [q-bio.NC]) http://arxiv.org/abs/2111.06518