arXiv Quantitative Biology @arxiv_bio@qoto.org

A Fisher-KPP Model with a Nonlocal Weighted Free Boundary. (arXiv:2112.00292v1 [math.AP]) http://arxiv.org/abs/2112.00292

Backward bifurcation and saddle-node bifurcation in virus-immune dynamics. (arXiv:2112.00340v1 [q-bio.PE]) http://arxiv.org/abs/2112.00340

Leveraging Sequence Embedding and Convolutional Neural Network for Protein Function Prediction. (arXiv:2112.00344v1 [q-bio.QM]) http://arxiv.org/abs/2112.00344

Generalized Modeling: A survey and guide. (arXiv:2112.00360v1 [q-bio.PE]) http://arxiv.org/abs/2112.00360

A multi-stage model of cell proliferation and death: tracking cell divisions with Erlang distributions. (arXiv:2112.00371v1 [q-bio.CB]) http://arxiv.org/abs/2112.00371

Orientation of Fitch Graphs and Detection of Horizontal Gene Transfer in Gene Trees. (arXiv:2112.00403v1 [cs.DM]) http://arxiv.org/abs/2112.00403

Parsimony and the rank of a flattening matrix. (arXiv:2111.14961v1 [q-bio.PE]) http://arxiv.org/abs/2111.14961

Fitness landscape adaptation in open replicator systems with competition: application to cancer therapy. (arXiv:2111.14964v1 [q-bio.PE]) http://arxiv.org/abs/2111.14964

SurvODE: Extrapolating Gene Expression Distribution for Early Cancer Identification. (arXiv:2111.15080v1 [q-bio.GN]) http://arxiv.org/abs/2111.15080

Application of Equal Local Levels to Improve Q-Q Plot Testing Bands with R Package qqconf. (arXiv:2111.15082v1 [stat.CO]) http://arxiv.org/abs/2111.15082

A Novel Heart Disease Classification Algorithm based on Fourier Transform and Persistent Homology. (arXiv:2111.15100v1 [q-bio.QM]) http://arxiv.org/abs/2111.15100

Decoding the Protein-ligand Interactions Using Parallel Graph Neural Networks. (arXiv:2111.15144v1 [stat.ML]) http://arxiv.org/abs/2111.15144

A universal framework to efficiently share material and process resources in the DNA construction world. (arXiv:2111.15175v1 [q-bio.QM]) http://arxiv.org/abs/2111.15175

small: A Programmatic Nanostructure Design and Modelling Environment. (arXiv:2111.15184v1 [q-bio.BM]) http://arxiv.org/abs/2111.15184

Brauer and partition diagram models for phylogenetic trees and forests. (arXiv:2111.15225v1 [q-bio.PE]) http://arxiv.org/abs/2111.15225

Phase transition in non-Markovian animal exploration model with preferential returns. (arXiv:2111.15231v1 [cond-mat.stat-mech]) http://arxiv.org/abs/2111.15231

Dependence of the nature of the Holstein polaron motion in a polynucleotide chain subjected to a constant electric field on the initial polaron state and the parameters of the chain. (arXiv:2111.13685v1 [cond-mat.stat-mech]) http://arxiv.org/abs/2111.13685

OmiTrans: generative adversarial networks based omics-to-omics translation framework. (arXiv:2111.13785v1 [q-bio.GN]) http://arxiv.org/abs/2111.13785

The PAT model of population dynamics. (arXiv:2111.13801v1 [q-bio.PE]) http://arxiv.org/abs/2111.13801

Effects of ligand binding on the energy landscape of acyl-CoA-binding protein. (arXiv:2111.13873v1 [physics.bio-ph]) http://arxiv.org/abs/2111.13873