arXiv Quantitative Biology @arxiv_bio@qoto.org

Does GNN Pretraining Help Molecular Representation?. (arXiv:2207.06010v1 [cs.LG]) http://arxiv.org/abs/2207.06010

YOLO2U-Net: Detection-Guided 3D Instance Segmentation for Microscopy. (arXiv:2207.06215v1 [eess.IV]) http://arxiv.org/abs/2207.06215

Predictive Coding: a Theoretical and Experimental Review. (arXiv:2107.12979v4 [cs.AI] UPDATED) http://arxiv.org/abs/2107.12979

Sharp thresholds limit the benefit of defector avoidance in cooperation on networks. (arXiv:2110.10866v2 [q-bio.PE] UPDATED) http://arxiv.org/abs/2110.10866

Laplacian paths in complex networks: information core emerges from entropic transitions. (arXiv:2202.06669v3 [physics.soc-ph] UPDATED) http://arxiv.org/abs/2202.06669

Fluctuation-driven plasticity allows for flexible rewiring of neuronal assemblies. (arXiv:2203.04641v2 [q-bio.NC] UPDATED) http://arxiv.org/abs/2203.04641

Inferring and Conveying Intentionality: Beyond Numerical Rewards to Logical Intentions. (arXiv:2207.05058v1 [cs.AI]) http://arxiv.org/abs/2207.05058

A Macrocolumn Architecture Implemented with Temporal (Spiking) Neurons. (arXiv:2207.05081v1 [cs.NE]) http://arxiv.org/abs/2207.05081

Pulsed interaction signals as a route to biological pattern formation. (arXiv:2207.05191v1 [q-bio.PE]) http://arxiv.org/abs/2207.05191

Entropy production of Multivariate Ornstein-Uhlenbeck processes correlates with consciousness levels in the human brain. (arXiv:2207.05197v1 [q-bio.NC]) http://arxiv.org/abs/2207.05197

An algebraic characterization of self-generating chemical reaction networks using semigroup models. (arXiv:2207.05335v1 [q-bio.MN]) http://arxiv.org/abs/2207.05335

HelixFold: An Efficient Implementation of AlphaFold2 using PaddlePaddle. (arXiv:2207.05477v1 [cs.DC]) http://arxiv.org/abs/2207.05477

Action potential solitons and waves in axons. (arXiv:2207.05491v1 [q-bio.NC]) http://arxiv.org/abs/2207.05491

Brain-inspired Graph Spiking Neural Networks for Commonsense Knowledge Representation and Reasoning. (arXiv:2207.05561v1 [cs.NE]) http://arxiv.org/abs/2207.05561

Long Short-Term Memory to predict 3D Amino acids Positions in GPCR Molecular Dynamics. (arXiv:2207.05682v1 [q-bio.BM]) http://arxiv.org/abs/2207.05682

Semigroup models for biochemical reaction networks. (arXiv:1908.04642v2 [q-bio.MN] UPDATED) http://arxiv.org/abs/1908.04642

Variational Mixtures of ODEs for Inferring Cellular Gene Expression Dynamics. (arXiv:2207.04166v1 [cs.LG]) http://arxiv.org/abs/2207.04166

Schizophrenia detection based on EEG using Recurrent Auto-Encoder framework. (arXiv:2207.04262v1 [q-bio.NC]) http://arxiv.org/abs/2207.04262

Emerging Patterns in the Continuum Representation of Protein-Lipid Fingerprints. (arXiv:2207.04333v1 [q-bio.QM]) http://arxiv.org/abs/2207.04333

Distributed-Memory Parallel Contig Generation for De Novo Long-Read Genome Assembly. (arXiv:2207.04350v1 [cs.DC]) http://arxiv.org/abs/2207.04350