arXiv Quantitative Biology @arxiv_bio@qoto.org

Pairwise sequence alignment at arbitrarily large evolutionary distance. (arXiv:2207.12543v1 [q-bio.PE]) http://arxiv.org/abs/2207.12543

Learning Protein Representations via Complete 3D Graph Networks. (arXiv:2207.12600v1 [cs.LG]) http://arxiv.org/abs/2207.12600

Quantitatively visualizing bipartite datasets. (arXiv:2207.12658v1 [physics.bio-ph]) http://arxiv.org/abs/2207.12658

Neural Design for Genetic Perturbation Experiments. (arXiv:2207.12805v1 [q-bio.QM]) http://arxiv.org/abs/2207.12805

Time-dependent maximum entropy model for populations of retinal ganglion cells. (arXiv:2207.12810v1 [q-bio.NC]) http://arxiv.org/abs/2207.12810

Inspecting the interaction between HIV and the immune system through genetic turnover. (arXiv:2207.12827v1 [q-bio.PE]) http://arxiv.org/abs/2207.12827

When can we reconstruct the ancestral state? Beyond Brownian motion. (arXiv:2207.12897v1 [q-bio.PE]) http://arxiv.org/abs/2207.12897

Knitting a Markov blanket is hard when you are out-of-equilibrium: two examples in canonical nonequilibrium models. (arXiv:2207.12914v1 [q-bio.NC]) http://arxiv.org/abs/2207.12914

Where is the mind within the brain? Transient selection of subnetworks by metabotropic receptors and G protein-gated ion channels. (arXiv:2207.11249v1 [q-bio.NC]) http://arxiv.org/abs/2207.11249

Communities in C.elegans connectome through the prism of non-backtracking walks. (arXiv:2207.11282v1 [q-bio.NC]) http://arxiv.org/abs/2207.11282

Modeling and Analysis of a Coupled SIS Bi-Virus Model. (arXiv:2207.11414v1 [q-bio.PE]) http://arxiv.org/abs/2207.11414

PepSIRF + QIIME 2: software tools for automated, reproducible analysis of highly-multiplexed serology data. (arXiv:2207.11509v1 [q-bio.QM]) http://arxiv.org/abs/2207.11509

A Ligand-and-structure Dual-driven Deep Learning Method for the Discovery of Highly Potent GnRH1R Antagonist to treat Uterine Diseases. (arXiv:2207.11547v1 [q-bio.BM]) http://arxiv.org/abs/2207.11547

Genetic similarity and genetic ancestry groups. (arXiv:2207.11595v1 [q-bio.PE]) http://arxiv.org/abs/2207.11595

Modeling Associative Plasticity between Synapses to Enhance Learning of Spiking Neural Networks. (arXiv:2207.11670v1 [cs.NE]) http://arxiv.org/abs/2207.11670

Calcium oscillation on homogeneous and heterogeneous networks of ryanodine receptor. (arXiv:2207.11695v1 [q-bio.SC]) http://arxiv.org/abs/2207.11695

Efficient population coding of sensory stimuli. (arXiv:2207.11712v1 [q-bio.NC]) http://arxiv.org/abs/2207.11712

A New Approach in MRI Signal Processing for Detecting the Axonal Organization of the Brain. (arXiv:2207.11783v1 [q-bio.NC]) http://arxiv.org/abs/2207.11783

Rubisco function, evolution, and engineering. (arXiv:2207.10773v1 [q-bio.BM]) http://arxiv.org/abs/2207.10773

Neuroimaging Feature Extraction using a Neural Network Classifier for Imaging Genetics. (arXiv:2207.10794v1 [q-bio.QM]) http://arxiv.org/abs/2207.10794