arXiv Quantitative Biology @arxiv_bio@qoto.org

Role of predator-prey reversal in Rock-Paper-Scissors models. (arXiv:2212.11687v1 [q-bio.PE]) http://arxiv.org/abs/2212.11687

Mind the Retrosynthesis Gap: Bridging the divide between Single-step and Multi-step Retrosynthesis Prediction. (arXiv:2212.11809v1 [physics.chem-ph]) http://arxiv.org/abs/2212.11809

SiteFerret: beyond simple pocket identification in proteins. (arXiv:2212.11888v1 [q-bio.BM]) http://arxiv.org/abs/2212.11888

CSI: Contrastive Data Stratification for Interaction Prediction and its Application to Compound-Protein Interaction Prediction. (arXiv:2111.09467v2 [cs.LG] UPDATED) http://arxiv.org/abs/2111.09467

Multiscale Graph Neural Networks for Protein Residue Contact Map Prediction. (arXiv:2212.02251v2 [q-bio.QM] UPDATED) http://arxiv.org/abs/2212.02251

Detecting Temporal shape changes with the Euler Characteristic Transform. (arXiv:2212.10883v2 [q-bio.QM] UPDATED) http://arxiv.org/abs/2212.10883

Anticancer Peptides Classification using Kernel Sparse Representation Classifier. (arXiv:2212.10567v1 [q-bio.QM]) http://arxiv.org/abs/2212.10567

Memory recall by controlling chaos. (arXiv:2212.10595v1 [q-bio.NC]) http://arxiv.org/abs/2212.10595

Page time and the order parameter for a consciousness state. (arXiv:2212.10602v1 [q-bio.NC]) http://arxiv.org/abs/2212.10602

MolCPT: Molecule Continuous Prompt Tuning to Generalize Molecular Representation Learning. (arXiv:2212.10614v1 [cs.LG]) http://arxiv.org/abs/2212.10614

Incorporating Shear into Stochastic Eulerian Lagrangian Methods for Rheological Studies of Complex Fluids and Soft Materials. (arXiv:2212.10651v1 [cond-mat.soft]) http://arxiv.org/abs/2212.10651

Estimating and Assessing Differential Equation Models with Time-Course Data. (arXiv:2212.10653v1 [q-bio.MN]) http://arxiv.org/abs/2212.10653

There's Plenty of Room Right Here: Biological Systems as Evolved, Overloaded, Multi-scale Machines. (arXiv:2212.10675v1 [cs.MA]) http://arxiv.org/abs/2212.10675

Embedding Positive Process Models into Lognormal Bayesian State Space Frameworks using Moment Matching. (arXiv:2212.10697v1 [stat.AP]) http://arxiv.org/abs/2212.10697

GraphIX: Graph-based In silico XAI(explainable artificial intelligence) for drug repositioning from biopharmaceutical network. (arXiv:2212.10788v1 [cs.LG]) http://arxiv.org/abs/2212.10788

Multi-modal Molecule Structure-text Model for Text-based Retrieval and Editing. (arXiv:2212.10789v1 [cs.LG]) http://arxiv.org/abs/2212.10789

Statistical Comparison among Brain Networks with Popular Network Measurement Algorithms. (arXiv:2212.09749v1 [q-bio.NC]) http://arxiv.org/abs/2212.09749

Denoising instrumented mouthguard measurements of head impact kinematics with a convolutional neural network. (arXiv:2212.09832v1 [cs.LG]) http://arxiv.org/abs/2212.09832

Metabolomics of Aging and Alzheimer's Disease: From Single-Omics to Multi-Omics. (arXiv:2212.09870v1 [q-bio.GN]) http://arxiv.org/abs/2212.09870

Evolutionary Dynamics in a Varying Environment: Continuous versus Discrete Noise. (arXiv:2212.09906v1 [q-bio.PE]) http://arxiv.org/abs/2212.09906