arXiv Quantitative Biology @arxiv_bio@qoto.org

CreoPep: A Universal Deep Learning Framework for Target-Specific Peptide Design and Optimization https://arxiv.org/abs/2505.02887 #qbioBM #csAI #csLG

Leveraging Protein Language Model Embeddings for Catalytic Turnover Prediction of Adenylate Kinase Orthologs in a Low-Data Regime https://arxiv.org/abs/2505.03066 #qbioQM

AutoLoop: a novel autoregressive deep learning method for protein loop prediction with high accuracy https://arxiv.org/abs/2505.03121 #qbioBM

An Active Inference perspective on Neurofeedback Training https://arxiv.org/abs/2505.03308 #qbioNC #csLG

The insertion of Neomycin cassette impairs maternal and social behaviors in Arc/Arg3.1 knock-out mice https://arxiv.org/abs/2505.03339 #qbioNC

Gene finding revisited: improved robustness through structured decoding from learned embeddings https://arxiv.org/abs/2505.03377 #qbioGN

MAP Format for Representing Chemical Modifications, Annotations, and Mutations in Protein Sequences: An Extension of the FASTA Format https://arxiv.org/abs/2505.03403 #qbioBM

The classification of Alzheimer's disease and mild cognitive impairment improved by dynamic functional network analysis https://arxiv.org/abs/2505.03458 #qbioNC #qbioQM

Binding threshold units with artificial oscillatory neurons https://arxiv.org/abs/2505.03648 #qbioNC #csAI #csLG

A review of DNA restriction-free overlapping sequence cloning techniques for synthetic biology https://arxiv.org/abs/2505.03681 #qbioBM

Enhancing TCR-Peptide Interaction Prediction with Pretrained Language Models and Molecular Representations https://arxiv.org/abs/2505.01433 #qbioQM #csCL #csLG

Burstiness and interpersonal foraging between human infants and caregivers in the vocal domain https://arxiv.org/abs/2505.01545 #qbioNC

Minimax entropy: The statistical physics of optimal models https://arxiv.org/abs/2505.01607 #qbioQM

Mathematical epidemiology of infectious diseases: an ongoing challenge https://arxiv.org/abs/2505.01621 #qbioPE

Interpretable graph-based models on multimodal biomedical data integration: A technical review and benchmarking https://arxiv.org/abs/2505.01696 #qbioGN #csAI

A mathematical model of human population reproduction through marriage https://arxiv.org/abs/2505.01727 #qbioPE #qbioQM

From Possibility to Precision in Macromolecular Ensemble Prediction https://arxiv.org/abs/2505.01919 #qbioBM

Bell's Inequalities and Entanglement in Corpora of Italian Language https://arxiv.org/abs/2505.02038 #qbioNC

Cognition without neurons: modelling anticipation in a basal reservoir computer https://arxiv.org/abs/2505.02114 #qbioNC #nlinAO #csNE

Heterosynaptic Circuits Are Universal Gradient Machines https://arxiv.org/abs/2505.02248 #condmatdisnn #qbioNC #qbioPE #csLG #csNE