arXiv Quantitative Biology @arxiv_bio@qoto.org

When repeats drive the vocabulary: a Byte-Pair Encoding analysis of T2T primate genomes https://arxiv.org/abs/2505.08918 #qbioGN #csAI

Multimodal Modeling of Ultradian Rhythms Using the Hankel Alternative View of Koopman (HAVOK) Analysis https://arxiv.org/abs/2505.08953 #qbioQM

An Exact Moment-Based Approach for Chemical Reaction-Diffusion Networks: From Mass Action to Hill Functions https://arxiv.org/abs/2505.09053 #qbioMN

A Comparative Review of RNA Language Models https://arxiv.org/abs/2505.09087 #qbioBM #csLG

Linear to Neural Networks Regression: QSPR of Drugs via Degree-Distance Indices https://arxiv.org/abs/2505.07821 #qbioBM #csLG

CellVerse: Do Large Language Models Really Understand Cell Biology? https://arxiv.org/abs/2505.07865 #qbioQM #qbioCB #csAI #csCL

GeoThinneR: An R Package for Efficient Spatial Thinning of Species Occurrences and Point Data https://arxiv.org/abs/2505.07867 #qbioPE #statAP

CGM Data Analysis 2.0: Functional Data Pattern Recognition and Artificial Intelligence Applications https://arxiv.org/abs/2505.07885 #qbioQM

Bridging Large Language Models and Single-Cell Transcriptomics in Dissecting Selective Motor Neuron Vulnerability https://arxiv.org/abs/2505.07896 #qbioGN #csAI

Revolutionising Bacterial Genomics: Graph-Based Strategies for Improved Variant Identification https://arxiv.org/abs/2505.07919 #qbioGN

Protein FID: Improved Evaluation of Protein Structure Generative Models https://arxiv.org/abs/2505.08041 #qbioBM

Preventing SARS-CoV-2 superspreading events with antiviral intranasal sprays https://arxiv.org/abs/2505.08053 #qbioQM

Efficient, simulation-free estimators of firing rates with Markovian surrogates https://arxiv.org/abs/2505.08254 #qbioNC #mathPR

Closed-Form Information Capacity of Canonical Signaling Models https://arxiv.org/abs/2505.08365 #qbioQM #mathIT #statAP #csIT

Attachment: a predictive coding approach https://arxiv.org/abs/2505.05476 #qbioNC

Qualia & Natural Selection: Formal Constraints on the Evolution of Consciousness https://arxiv.org/abs/2505.05480 #qbioNC

Structure & Quality: Conceptual and Formal Foundations for the Mind-Body Problem https://arxiv.org/abs/2505.05481 #qbioNC #csAI

A Neuro-Dynamic Mathematical Model of Dream Formation and Spontaneous Cognitive Activity https://arxiv.org/abs/2505.05483 #qbioNC

The cognitive triple-slit experiment https://arxiv.org/abs/2505.05497 #quantph #qbioNC

Nature's Insight: A Novel Framework and Comprehensive Analysis of Agentic Reasoning Through the Lens of Neuroscience https://arxiv.org/abs/2505.05515 #qbioNC #csLG