arXiv Quantitative Biology @arxiv_bio@qoto.org

Towards interpretable prediction of recurrence risk in breast cancer using pathology foundation models https://arxiv.org/abs/2508.12025 #qbioTO

BConformeR: A Conformer Based on Mutual Sampling for Unified Prediction of Continuous and Discontinuous Antibody Binding Sites https://arxiv.org/abs/2508.12029 #qbioBM #csAI #csCE #csLG

Applied causality to infer protein dynamics and kinetics https://arxiv.org/abs/2508.12060 #physicsbioph #qbioBM

zERExtractor:An Automated Platform for Enzyme-Catalyzed Reaction Data Extraction from Scientific Literature https://arxiv.org/abs/2508.09995 #qbioBM #csET #csLG

Unifying equivalences across unsupervised learning, network science, and imaging/network neuroscience https://arxiv.org/abs/2508.10045 #qbioNC

An Intelligent Infrastructure as a Foundation for Modern Science https://arxiv.org/abs/2508.10051 #qbioNC #csET

SurgPub-Video: A Comprehensive Surgical Video Dataset for Enhanced Surgical Intelligence in Vision-Language Model https://arxiv.org/abs/2508.10054 #qbioOT

Large Language Models Show Signs of Alignment with Human Neurocognition During Abstract Reasoning https://arxiv.org/abs/2508.10057 #qbioNC #csAI #csCL

A Structural Analysis of Population Graphs https://arxiv.org/abs/2508.10058 #qbioQM

Excessive Screen Time is Associated with Mental Health Problems and ADHD in US Children and Adolescents: Physical Activity and Sleep as Parallel Mediators https://arxiv.org/abs/2508.10062 #qbioNC

Dynamical Alignment: A Principle for Adaptive Neural Computation https://arxiv.org/abs/2508.10064 #qbioNC #csLG

Developing an Inhaled NEU1 Inhibitor for Cystic Fibrosis via Pharmacokinetic and Biophysical Modeling https://arxiv.org/abs/2508.10082 #qbioQM

In silico study on the cytotoxicity against Hela cancer cells of xanthones bioactive compounds from Garcinia cowa: QSAR based on Graph Deep Learning, Network Pharmacology, and Molecular Docking https://arxiv.org/abs/2508.10117 #qbioMN #csLG

SiCmiR Atlas: Single-Cell miRNA Landscapes Reveals Hub-miRNA and Network Signatures in Human Cancers https://arxiv.org/abs/2508.05692 #qbioGN

Designing de novo TIM Barrels: Insights into Stabilization, Diversification, and Functionalization Strategies https://arxiv.org/abs/2508.05699 #qbioBM

A Physiologically-Constrained Neural Network Digital Twin Framework for Replicating Glucose Dynamics in Type 1 Diabetes https://arxiv.org/abs/2508.05705 #qbioQM #csAI #csLG

Progress and new challenges in image-based profiling https://arxiv.org/abs/2508.05800 #qbioQM #eessIV

Identifiability of Large Phylogenetic Mixtures for Many Phylogenetic Model Structures https://arxiv.org/abs/2508.05832 #qbioPE #mathAG #mathCO #mathST #statTH

Optimal trap cropping investments to maximize agricultural yield https://arxiv.org/abs/2508.05896 #qbioPE

Diverse Neural Sequences in QIF Networks: An Analytically Tractable Framework for Synfire Chains and Hippocampal Replay https://arxiv.org/abs/2508.06085 #qbioNC #csNE