arXiv Quantitative Biology @arxiv_bio@qoto.org

APObind: A Dataset of Ligand Unbound Protein Conformations for Machine Learning Applications in De Novo Drug Design. (arXiv:2108.09926v1 [q-bio.BM]) http://arxiv.org/abs/2108.09926

Local contact inhibition leads to universal principles of cell population growth. (arXiv:2108.10000v1 [q-bio.PE]) http://arxiv.org/abs/2108.10000

Mutational signatures and transmissibility of SARS-CoV-2 Gamma and Lambda variants. (arXiv:2108.10018v1 [q-bio.PE]) http://arxiv.org/abs/2108.10018

Modeling COVID-19 uncertainties evolving over time and density-dependent social reinforcement and asymptomatic infections. (arXiv:2108.10029v1 [stat.ML]) http://arxiv.org/abs/2108.10029

Agentization of Two Population-Driven Models of Mathematical Biology. (arXiv:2108.08916v1 [q-bio.PE]) http://arxiv.org/abs/2108.08916

Assessing Cerebellar Disorders With Wearable Inertial Sensor Data Using Time-Frequency and Autoregressive Hidden Markov Model Approaches. (arXiv:2108.08975v1 [q-bio.NC]) http://arxiv.org/abs/2108.08975

Sparse-Denoising Methods for Extracting Desaturation Transients in Cerebral Oxygenation Signals of Preterm Infants. (arXiv:2108.09217v1 [q-bio.QM]) http://arxiv.org/abs/2108.09217

Model comparison via simplicial complexes and persistent homology. (arXiv:2012.13039v3 [math.AT] UPDATED) http://arxiv.org/abs/2012.13039

CDS -- Causal Inference with Deep Survival Model and Time-varying Covariates. (arXiv:2101.10643v10 [stat.ML] UPDATED) http://arxiv.org/abs/2101.10643

Persistent topology of protein space. (arXiv:2102.06768v2 [q-bio.BM] UPDATED) http://arxiv.org/abs/2102.06768

Interplay of periodic dynamics and noise: insights from a simple adaptive system. (arXiv:2108.01451v2 [cond-mat.stat-mech] UPDATED) http://arxiv.org/abs/2108.01451

Active transport in complex environments. (arXiv:2108.07011v2 [physics.bio-ph] UPDATED) http://arxiv.org/abs/2108.07011

ALLNet: A Hybrid Convolutional Neural Network to Improve Diagnosis of Acute Lymphocytic Leukemia (ALL) in White Blood Cells. (arXiv:2108.08195v1 [cs.CV] CROSS LISTED) http://arxiv.org/abs/2108.08195

ALBRT: Cellular Composition Prediction in Routine Histology Images. (arXiv:2108.08306v1 [q-bio.QM]) http://arxiv.org/abs/2108.08306

Designing drug regimens that mitigate nonadherence. (arXiv:2108.08358v1 [q-bio.QM]) http://arxiv.org/abs/2108.08358

Learning System Parameters from Turing Patterns. (arXiv:2108.08542v1 [cs.LG]) http://arxiv.org/abs/2108.08542

A signal of competitive dominance in mid-latitude herbaceous plant communities. (arXiv:1605.09682v3 [q-bio.PE] UPDATED) http://arxiv.org/abs/1605.09682

An Introductory Tutorial on Cohort State-Transition Models in R Using a Cost-Effectiveness Analysis Example. (arXiv:2001.07824v3 [stat.AP] UPDATED) http://arxiv.org/abs/2001.07824

Graph Neural Network Based Coarse-Grained Mapping Prediction. (arXiv:2007.04921v3 [q-bio.QM] UPDATED) http://arxiv.org/abs/2007.04921

SimpleSBML: A Python package for creating, editing, and interrogating SBML models: Version 2.0. (arXiv:2009.01969v3 [q-bio.MN] UPDATED) http://arxiv.org/abs/2009.01969