arXiv Quantitative Biology @arxiv_bio@qoto.org

BLANT: Basic Local Alignment of Network Topology, Part 2: Topology-only Extension Beyond Graphlet Seeds. (arXiv:2207.04351v1 [q-bio.MN]) http://arxiv.org/abs/2207.04351

BLANT: Basic Local Alignment of Network Topology, Part 1: Seeding local alignments with unambiguous 8-node graphlets. (arXiv:2207.04353v1 [q-bio.MN]) http://arxiv.org/abs/2207.04353

TCR: A Transformer Based Deep Network for Predicting Cancer Drugs Response. (arXiv:2207.04457v1 [cs.LG]) http://arxiv.org/abs/2207.04457

Automatic differentiation and the optimization of differential equation models in biology. (arXiv:2207.04487v1 [q-bio.QM]) http://arxiv.org/abs/2207.04487

Stochastic dynamics and ribosome-RNAP interactions in Transcription-Translation Coupling. (arXiv:2207.04568v1 [q-bio.SC]) http://arxiv.org/abs/2207.04568

Adaptive survival movement strategy to local epidemic outbreaks in cyclic models. (arXiv:2207.04577v1 [q-bio.PE]) http://arxiv.org/abs/2207.04577

Winning the lottery with neurobiology: faster learning on many cognitive tasks with fixed sparse RNNs. (arXiv:2207.03523v1 [q-bio.NC]) http://arxiv.org/abs/2207.03523

Data integration in systems genetics and aging research. (arXiv:2207.03540v1 [q-bio.OT]) http://arxiv.org/abs/2207.03540

Enhanced brain structure-function tethering in transmodal cortex revealed by high-frequency eigenmodes. (arXiv:2207.03569v1 [q-bio.NC]) http://arxiv.org/abs/2207.03569

A Mobility-Driven Spatially Explicit SEIQRD COVID-19 Model with VOCs, seasonality, and vaccines. (arXiv:2207.03717v1 [physics.soc-ph]) http://arxiv.org/abs/2207.03717

Demographic noise in complex ecological communities. (arXiv:2207.03805v1 [q-bio.PE]) http://arxiv.org/abs/2207.03805

Habitat connectivity in agricultural landscapes improving multi-functionality of constructed wetlands as nature-based solutions. (arXiv:2207.03826v1 [q-bio.PE]) http://arxiv.org/abs/2207.03826

Reproducing sensory induced hallucinations via neural fields. (arXiv:2207.03901v1 [q-bio.NC]) http://arxiv.org/abs/2207.03901

Finite element methods for large-strain poroelasticity/chemotaxis models simulating the formation of myocardial oedema. (arXiv:2111.04206v2 [math.NA] UPDATED) http://arxiv.org/abs/2111.04206

Automated Cancer Subtyping via Vector Quantization Mutual Information Maximization. (arXiv:2206.10801v2 [cs.LG] UPDATED) http://arxiv.org/abs/2206.10801

The coalescent with arbitrary spatial and genetic structure. (arXiv:2207.02880v1 [q-bio.PE]) http://arxiv.org/abs/2207.02880

The martingale Z-test. (arXiv:2207.02893v1 [stat.ME]) http://arxiv.org/abs/2207.02893

The Variations of SIkJalpha Model for COVID-19 Forecasting and Scenario Projections. (arXiv:2207.02919v1 [q-bio.PE]) http://arxiv.org/abs/2207.02919

Multi-scale Sinusoidal Embeddings Enable Learning on High Resolution Mass Spectrometry Data. (arXiv:2207.02980v1 [cs.LG]) http://arxiv.org/abs/2207.02980

Orthogonal Matrix Retrieval with Spatial Consensus for 3D Unknown-View Tomography. (arXiv:2207.02985v1 [math.OC]) http://arxiv.org/abs/2207.02985