arXiv Quantitative Biology @arxiv_bio@qoto.org

GGL-PPI: Geometric Graph Learning to Predict Mutation-Induced Binding Free Energy Changes. (arXiv:2309.13484v1 [q-bio.BM]) http://arxiv.org/abs/2309.13484

Mathematical modelling of the first HIV/ZIKV co-infection cases in Colombia and Brazil. (arXiv:2309.12385v1 [q-bio.PE]) http://arxiv.org/abs/2309.12385

A comparative data study on dinosaur, bird and human bone attributes -- A supporting study for convergent evolution. (arXiv:2309.12435v1 [q-bio.PE]) http://arxiv.org/abs/2309.12435

Ying-Yang Competitive Harmony between Direct and Indirect Pathways in A Spiking Neural Network of The Basal Ganglia. (arXiv:2309.12540v1 [q-bio.NC]) http://arxiv.org/abs/2309.12540

Insights from exact social contagion dynamics on networks with higher-order structures. (arXiv:2309.12752v1 [physics.soc-ph]) http://arxiv.org/abs/2309.12752

The role of the nucleus for cell mechanics: an elastic phase field approach. (arXiv:2309.12777v1 [cond-mat.soft]) http://arxiv.org/abs/2309.12777

A Spectral Theory of Neural Prediction and Alignment. (arXiv:2309.12821v1 [q-bio.NC]) http://arxiv.org/abs/2309.12821

Building explainable graph neural network by sparse learning for the drug-protein binding prediction. (arXiv:2309.12906v1 [q-bio.BM]) http://arxiv.org/abs/2309.12906

Emergent mechanisms for long timescales depend on training curriculum and affect performance in memory tasks. (arXiv:2309.12927v1 [cs.NE]) http://arxiv.org/abs/2309.12927

A Hybrid Deep Learning-based Approach for Optimal Genotype by Environment Selection. (arXiv:2309.13021v1 [cs.LG]) http://arxiv.org/abs/2309.13021

Virus Dynamics with Behavioral Responses. (arXiv:2004.14533v5 [q-bio.PE] UPDATED) http://arxiv.org/abs/2004.14533

Gene Expression Patterns of CsZCD and Apocarotenoid Accumulation during Saffron Stigma Development. (arXiv:2309.11513v1 [q-bio.OT]) http://arxiv.org/abs/2309.11513

Rapid Changes in Synchronizability in Conductance-based Neuronal Networks with Conductance-based Coupling. (arXiv:2309.11586v1 [q-bio.NC]) http://arxiv.org/abs/2309.11586

High-content stimulated Raman histology of human breast cancer. (arXiv:2309.11642v1 [q-bio.TO]) http://arxiv.org/abs/2309.11642

Large-scale Pretraining Improves Sample Efficiency of Active Learning based Molecule Virtual Screening. (arXiv:2309.11687v1 [cs.LG]) http://arxiv.org/abs/2309.11687

Differentiable Phylogenetics via Hyperbolic Embeddings with Dodonaphy. (arXiv:2309.11732v1 [q-bio.PE]) http://arxiv.org/abs/2309.11732

Four universal growth regimes in degree-dependent first passage percolation on spatial random graphs I. (arXiv:2309.11840v1 [math.PR]) http://arxiv.org/abs/2309.11840

Four universal growth regimes in degree-dependent first passage percolation on spatial random graphs II. (arXiv:2309.11880v1 [math.PR]) http://arxiv.org/abs/2309.11880

Genetic Composition of Supercritical Branching Populations under Power Law Mutation Rates. (arXiv:2309.12055v1 [math.PR]) http://arxiv.org/abs/2309.12055

A High-Throughput Steered Molecular Dynamics Study on the Free Energy Profile of Ion Permeation through Gramicidin A. (arXiv:2309.12088v1 [physics.chem-ph]) http://arxiv.org/abs/2309.12088