arXiv Quantitative Biology @arxiv_bio@qoto.org

Multi-modal Molecule Structure-text Model for Text-based Retrieval and Editing. (arXiv:2212.10789v3 [cs.LG] UPDATED) http://arxiv.org/abs/2212.10789

Snakes and Ladders: a Treewidth Story. (arXiv:2302.10662v2 [math.CO] UPDATED) http://arxiv.org/abs/2302.10662

Interpreting Time Series Transformer Models and Sensitivity Analysis of Population Age Groups to COVID-19 Infections. (arXiv:2401.15119v1 [cs.LG]) http://arxiv.org/abs/2401.15119

A Multi-Grained Symmetric Differential Equation Model for Learning Protein-Ligand Binding Dynamics. (arXiv:2401.15122v1 [cs.LG]) http://arxiv.org/abs/2401.15122

Transduction of an immortalized olfactory ensheathing glia cell line with the green fluorescent protein (GFP) gene: evaluation of its neuroregenerative capacity as a proof of concept. (arXiv:2401.15133v1 [q-bio.CB]) http://arxiv.org/abs/2401.15133

Moment-based metrics for molecules computable from cryo-EM images. (arXiv:2401.15183v1 [q-bio.BM]) http://arxiv.org/abs/2401.15183

Limited data on infectious disease distribution exposes ambiguity in epidemic modeling choices. (arXiv:2401.15190v1 [q-bio.PE]) http://arxiv.org/abs/2401.15190

EM and XRM Connectomics Imaging and Experimental Metadata Standards. (arXiv:2401.15251v1 [q-bio.NC]) http://arxiv.org/abs/2401.15251

Product Manifold Representations for Learning on Biological Pathways. (arXiv:2401.15478v1 [q-bio.QM]) http://arxiv.org/abs/2401.15478

Ambitions for theory in the physics of life. (arXiv:2401.15538v1 [physics.bio-ph]) http://arxiv.org/abs/2401.15538

Revising clustering and small-worldness in brain networks. (arXiv:2401.15630v1 [q-bio.NC]) http://arxiv.org/abs/2401.15630

Programmable biomolecule-mediated processors. (arXiv:2401.15669v1 [cs.ET]) http://arxiv.org/abs/2401.15669

Improving Antibody Humanness Prediction using Patent Data. (arXiv:2401.14442v1 [q-bio.QM]) http://arxiv.org/abs/2401.14442

Nonlocal Models in Biology and Life Sciences: Sources, Developments, and Applications. (arXiv:2401.14651v1 [q-bio.QM]) http://arxiv.org/abs/2401.14651

PepGB: Facilitating peptide drug discovery via graph neural networks. (arXiv:2401.14665v1 [q-bio.BM]) http://arxiv.org/abs/2401.14665

Endowing Protein Language Models with Structural Knowledge. (arXiv:2401.14819v1 [q-bio.QM]) http://arxiv.org/abs/2401.14819

Amplifiers of selection for the Moran process with both Birth-death and death-Birth updating. (arXiv:2401.14914v1 [q-bio.PE]) http://arxiv.org/abs/2401.14914

An innovative in silico model of the oral mucosa reveals the impact of extracellular spaces on chemical permeation through epithelium. (arXiv:2401.14928v1 [q-bio.TO]) http://arxiv.org/abs/2401.14928

Lane formation and aggregation spots in a model of ants. (arXiv:2401.15046v1 [math.AP]) http://arxiv.org/abs/2401.15046

Influence of Material Parameter Variability on the Predicted Coronary Artery Biomechanical Environment via Uncertainty Quantification. (arXiv:2401.15047v1 [q-bio.TO]) http://arxiv.org/abs/2401.15047