arXiv Quantitative Biology @arxiv_bio@qoto.org

FlowCyt: A Comparative Study of Deep Learning Approaches for Multi-Class Classification in Flow Cytometry Benchmarking https://arxiv.org/abs/2403.00024 #qbioQM #cs.LG

Non-Invasive Medical Digital Twins using Physics-Informed Self-Supervised Learning https://arxiv.org/abs/2403.00177 #qbioQM #cs.LG

Exploring Gene Regulatory Interaction Networks and predicting therapeutic molecules for Hypopharyngeal Cancer and EGFR-mutated lung adenocarcinoma https://arxiv.org/abs/2402.17807 #qbioGN #csLG

BioT5+: Towards Generalized Biological Understanding with IUPAC Integration and Multi-task Tuning https://arxiv.org/abs/2402.17810 #qbioQM #csAI #csCE #csLG

Public Goods Games in Disease Evolution and Spread https://arxiv.org/abs/2402.17842 #qbioPE

StaPep: an open-source tool for the structure prediction and feature extraction of hydrocarbon-stapled peptides https://arxiv.org/abs/2402.17997 #qbioBM

Neurological disorders leading to mechanical dysfunction of the esophagus: an emergent behavior of a neuromechanical dynamical system https://arxiv.org/abs/2402.18103 #physicsbioph #qbioNC

Ten simple rules for collaborating with wet lab researchers for computational researchers https://arxiv.org/abs/2402.18348 #qbioOT

Why Do Animals Need Shaping? A Theory of Task Composition and Curriculum Learning https://arxiv.org/abs/2402.18361 #condmatdisnn #qbioNC

Deep Confident Steps to New Pockets: Strategies for Docking Generalization https://arxiv.org/abs/2402.18396 #qbioBM #csLG

FAST functional connectivity implicates P300 connectivity in working memory deficits in Alzheimer's disease https://arxiv.org/abs/2402.18489 #qbioNC #eessSP

A paper-based multiplexed serological test to monitor immunity against SARS-CoV-2 using machine learning https://arxiv.org/abs/2402.17774 #physics.med-ph #physicsbioph #qbioQM

Attention Based Molecule Generation via Hierarchical Variational Autoencoder https://arxiv.org/abs/2402.16854 #qbioBM #csLG

Topological Analysis of Mouse Brain Vasculature via 3D Light-sheet Microscopy Images https://arxiv.org/abs/2402.16894 #qbioNC #eessIV

FGBERT: Function-Driven Pre-trained Gene Language Model for Metagenomics https://arxiv.org/abs/2402.16901 #qbioGN #csAI #csLG

An optimal transport model for dynamical shapes, collective motion and cellular aggregates https://arxiv.org/abs/2402.17086 #qbioQM #mathDS #mathNA #csNA

Exact and efficient phylodynamic simulation from arbitrarily large populations https://arxiv.org/abs/2402.17153 #qbioPE

Methylation Operation Wizard (MeOW): Identification of differentially methylated regions in long-read sequencing data https://arxiv.org/abs/2402.17182 #qbioGN #qbioQM

Deep Learning-based Kinetic Analysis in Paper-based Analytical Cartridges Integrated with Field-effect Transistors https://arxiv.org/abs/2402.17209 #physicsinsdet #physicsappph #qbioQM

tttrlib: modular software for integrating fluorescence spectroscopy, imaging, and molecular modeling https://arxiv.org/abs/2402.17252 #physicsbioph #qbioQM