arXiv Quantitative Biology @arxiv_bio@qoto.org

A Field Guide to Scientific XAI: Transparent and Interpretable Deep Learning for Bioinformatics Research. (arXiv:2110.08253v1 [cs.LG]) http://arxiv.org/abs/2110.08253

Estimating individual admixture from finite reference databases. (arXiv:2110.08348v1 [q-bio.PE]) http://arxiv.org/abs/2110.08348

Metagenome assembly of high-fidelity long reads with hifiasm-meta. (arXiv:2110.08457v1 [q-bio.GN]) http://arxiv.org/abs/2110.08457

A Heterogeneous Graph Based Framework for Multimodal Neuroimaging Fusion Learning. (arXiv:2110.08465v1 [cs.LG]) http://arxiv.org/abs/2110.08465

Fast Projection onto the Capped Simplex withApplications to Sparse Regression in Bioinformatics. (arXiv:2110.08471v1 [math.OC]) http://arxiv.org/abs/2110.08471

Cellular resource allocation strategies for cell size and shape control in bacteria. (arXiv:2110.08575v1 [q-bio.CB]) http://arxiv.org/abs/2110.08575

When heart beats differently in depression: a review of HRV measures. (arXiv:2110.08621v1 [q-bio.NC]) http://arxiv.org/abs/2110.08621

A model for full local image interpretation. (arXiv:2110.08744v1 [cs.AI]) http://arxiv.org/abs/2110.08744

Understanding the network formation pattern for better link prediction. (arXiv:2110.08850v1 [physics.soc-ph]) http://arxiv.org/abs/2110.08850

Using Clinical Drug Representations for Improving Mortality and Length of Stay Predictions. (arXiv:2110.08918v1 [cs.LG]) http://arxiv.org/abs/2110.08918

$\beta$-Carotene bioavailability and conversion efficiency are significantly affected by sex in rats. First observation suggesting a possible hormetic regulation of vitamin A metabolism in female rats. (arXiv:2110.07605v1 [q-bio.TO]) http://arxiv.org/abs/2110.07605

3D Structure from 2D Microscopy images using Deep Learning. (arXiv:2110.07608v1 [q-bio.QM]) http://arxiv.org/abs/2110.07608

Application of Sequence Embedding in Protein Sequence-Based Predictions. (arXiv:2110.07609v1 [q-bio.QM]) http://arxiv.org/abs/2110.07609

Kuramoto model for populations of quadratic integrate-and-fire neurons with chemical and electrical coupling. (arXiv:2110.07665v1 [nlin.AO]) http://arxiv.org/abs/2110.07665

Evolutionary trajectory and origin of SARS-CoV-2. (arXiv:2110.07696v1 [q-bio.OT]) http://arxiv.org/abs/2110.07696

Pre-training Molecular Graph Representation with 3D Geometry. (arXiv:2110.07728v1 [q-bio.QM]) http://arxiv.org/abs/2110.07728

Convergence of regularized particle filters for stochastic reaction networks. (arXiv:2110.07746v1 [q-bio.QM]) http://arxiv.org/abs/2110.07746

Analysis and visualization of spatial transcriptomic data. (arXiv:2110.07787v1 [q-bio.QM]) http://arxiv.org/abs/2110.07787

A novel framework to quantify uncertainty in peptide-tandem mass spectrum matches with application to nanobody peptide identification. (arXiv:2110.07818v1 [q-bio.QM]) http://arxiv.org/abs/2110.07818

Rapid genetic screening with high quality factor metasurfaces. (arXiv:2110.07862v1 [physics.optics]) http://arxiv.org/abs/2110.07862