arXiv Quantitative Biology @arxiv_bio@qoto.org

Re-Dock: Towards Flexible and Realistic Molecular Docking with Diffusion Bridge https://arxiv.org/abs/2402.11459 #physicschemph #qbioBM #csAI #csLG

DDIPrompt: Drug-Drug Interaction Event Prediction based on Graph Prompt Learning https://arxiv.org/abs/2402.11472 #qbioBM #csAI #csLG

CowScape: Quantitative reconstruction of the conformational landscape of biological macromolecules from cryo-EM data https://arxiv.org/abs/2402.11589 #qbioBM

On the importance of assessing topological convergence in Bayesian phylogenetic inference https://arxiv.org/abs/2402.11657 #qbioPE #qbioGN #qbioQM

Identifying circular orders for blobs in phylogenetic networks https://arxiv.org/abs/2402.11693 #qbioPE #mathCO

The geometry of chromatin https://arxiv.org/abs/2402.09408 #qbioBM

Deep Manifold Transformation for Protein Representation Learning https://arxiv.org/abs/2402.09416 #qbioBM #csLG

AI-Enabled Lung Cancer Prognosis https://arxiv.org/abs/2402.09476 #qbioQM #eessIV #csAI

Evaluation of simulation methods for tumor subclonal reconstruction https://arxiv.org/abs/2402.09599 #qbioGN

Canalization reduces the nonlinearity of regulation in biological networks https://arxiv.org/abs/2402.09703 #qbioMN #mathDS

Data Smoothing Filling Method based on ScRNA-Seq Data Zero-Value Identification https://arxiv.org/abs/2402.09755 #qbioGN #mathIT #csIT

Optimizing Temporal Waveform Analysis: A Novel Pipeline for Efficient Characterization of Left Coronary Artery Velocity Profiles https://arxiv.org/abs/2402.10146 #qbioQM

Transition from time-variant to static networks: timescale separation in NIMFA SIS epidemics https://arxiv.org/abs/2305.12446 #math.DS #qbioPE

Wavelet Analysis of Noninvasive EEG Signals Discriminates Complex and Natural Grasp Types https://arxiv.org/abs/2402.09447 #eess.SP #qbioNC #cs.AI #cs.LG

Different Algorithms (Might) Uncover Different Patterns: A Brain-Age Prediction Case Study https://arxiv.org/abs/2402.09464 #eess.SP #qbioQM #cs.LG

Optimal control of collective electrotaxis in epithelial monolayers https://arxiv.org/abs/2402.08700 #qbioQM #mathDS

A Survey of Generative AI for De Novo Drug Design: New Frontiers in Molecule and Protein Generation https://arxiv.org/abs/2402.08703 #qbioBM #csAI #csLG

DNABERT-S: Learning Species-Aware DNA Embedding with Genome Foundation Models https://arxiv.org/abs/2402.08777 #qbioGN #csAI #csCE #csCL

WGTDA: A Topological Perspective to Biomarker Discovery in Gene Expression Data https://arxiv.org/abs/2402.08807 #qbioQM

Cosmic radiation drives quasi-periodic changes in the diversity of siliceous marine microplankton https://arxiv.org/abs/2402.09163 #physicsaoph #astrophEP #astrophGA #astrophHE #qbioPE