arXiv Quantitative Biology @arxiv_bio@qoto.org

PRAGA: Prototype-aware Graph Adaptive Aggregation for Spatial Multi-modal Omics Analysis https://arxiv.org/abs/2409.12728 #qbioGN #csLG

Dynamics of solutions to a multi-patch epidemic model with a saturation incidence mechanism https://arxiv.org/abs/2409.11443 #qbioPE

Compatibility studies of loquat scions with loquat and quince rootstocks https://arxiv.org/abs/2409.11451 #qbioOT

A weather-driven mathematical model of Culex population abundance and the impact of vector control interventions https://arxiv.org/abs/2409.11550 #physicsbioph #qbioPE

Automating proton PBS treatment planning for head and neck cancers using policy gradient-based deep reinforcement learning https://arxiv.org/abs/2409.11576 #qbioQM #csAI #csLG

How to Build the Virtual Cell with Artificial Intelligence: Priorities and Opportunities https://arxiv.org/abs/2409.11654 #qbioQM #qbioNC #csAI #csLG

k-mer-based approaches to bridging pangenomics and population genetics https://arxiv.org/abs/2409.11683 #qbioPE #qbioGN

Early reduced dopaminergic tone mediated by D3 receptor and dopamine transporter in absence epileptogenesis https://arxiv.org/abs/2409.11758 #qbioNC

Biological arrow of time: Emergence of tangled information hierarchies and self-modelling dynamics https://arxiv.org/abs/2409.12029 #qbioPE #nlinAO #nlinCG #csFL #csLO

Design of Ligand-Binding Proteins with Atomic Flow Matching https://arxiv.org/abs/2409.12080 #qbioBM

Optimal Visual Search with Highly Heuristic Decision Rules https://arxiv.org/abs/2409.12124 #qbioNC #statAP #csCV

Temporal and Spacial Studies of Infectious Diseases: Mathematical Models and Numerical Solvers https://arxiv.org/abs/2409.10556 #qbioQM #mathDS

Recent advances in deep learning and language models for studying the microbiome https://arxiv.org/abs/2409.10579 #qbioQM #csAI #csLG

Manifold-Constrained Nucleus-Level Denoising Diffusion Model for Structure-Based Drug Design https://arxiv.org/abs/2409.10584 #qbioQM #qbioBM #statML #csAI #csLG

Opponent Shaping for Antibody Development https://arxiv.org/abs/2409.10588 #qbioPE #csAI #csGT #csMA

Foundations of ecological and evolutionary change https://arxiv.org/abs/2409.10766 #qbioPE

Opportunities and challenges of mRNA technologies in development of Dengue Virus Vaccine https://arxiv.org/abs/2409.10805 #qbioOT

Active learning for energy-based antibody optimization and enhanced screening https://arxiv.org/abs/2409.10964 #qbioBM #qbioQM #csAI #csLG

Higher-order interactions in random Lotka-Volterra communities https://arxiv.org/abs/2409.10990 #condmatdisnn #qbioPE

A computational framework for optimal and Model Predictive Control of stochastic gene regulatory networks https://arxiv.org/abs/2409.11036 #qbioQM