arXiv Quantitative Biology @arxiv_bio@qoto.org

AI Model for Predicting Binding Affinity of Antidiabetic Compounds Targeting PPAR https://arxiv.org/abs/2412.20011 #qbioBM

BioTD: an online database of biotoxins https://arxiv.org/abs/2412.20038 #qbioBM

The Illusion-Illusion: Vision Language Models See Illusions Where There are None https://arxiv.org/abs/2412.18613 #qbioNC #csCL #csCV

Self-assembling T7 phage syringes with modular genomes for targeted delivery of penicillin against beta-lactam-resistant Escherichia coli https://arxiv.org/abs/2412.18687 #qbioQM

Metabolic scaling, life history, and the equal fitness paradigm https://arxiv.org/abs/2412.18745 #qbioPE

PhyloGen: Language Model-Enhanced Phylogenetic Inference via Graph Structure Generation https://arxiv.org/abs/2412.18827 #qbioPE #csAI

Biology Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models https://arxiv.org/abs/2412.19191 #qbioBM #csAI #csLG

Deep learning and whole-brain networks for biomarker discovery: modeling the dynamics of brain fluctuations in resting-state and cognitive tasks https://arxiv.org/abs/2412.19329 #qbioNC #csLG

Signatures of prediction during natural listening in MEG data? https://arxiv.org/abs/2412.19622 #qbioNC

The impact of simultaneous infections on phage-host ecology https://arxiv.org/abs/2412.19717 #qbioPE

Bottom-up robust modeling for the foraging behavior of Physarum polycephalum https://arxiv.org/abs/2412.19790 #qbioPE

Identifiability of the spatial SEIR-HCD model of COVID-19 propagation https://arxiv.org/abs/2412.18858 #physics.soc-ph #math.OC #qbioPE

Finest decomposition coarsening of reaction networks of biochemical systems https://arxiv.org/abs/2412.15225 #qbioMN #mathDS

Learning Biomolecular Models using Signal Temporal Logic https://arxiv.org/abs/2412.15227 #qbioMN

Predicting Artificial Neural Network Representations to Learn Recognition Model for Music Identification from Brain Recordings https://arxiv.org/abs/2412.15560 #qbioNC #eessAS #eessSP #csLG #csSD

Synaptic plasticity alters the nature of chaos transition in neural networks https://arxiv.org/abs/2412.15592 #condmatstatmech #condmatdisnn #qbioNC

Modeling Autonomous Shifts Between Focus State and Mind-Wandering Using a Predictive-Coding-Inspired Variational RNN Model https://arxiv.org/abs/2412.15620 #qbioNC #csAI

Does the brain behave like a (complex) network? I. Dynamics https://arxiv.org/abs/2412.15711 #condmatdisnn #qbioNC #nlinAO

GraphSeqLM: A Unified Graph Language Framework for Omic Graph Learning https://arxiv.org/abs/2412.15790 #qbioQM #csAI #csLG

Mamba-based Deep Learning Approaches for Sleep Staging on a Wireless Multimodal Wearable System without Electroencephalography https://arxiv.org/abs/2412.15947 #qbioQM #csLG