arXiv Quantitative Biology @arxiv_bio@qoto.org

A cell-level model to predict the spatiotemporal dynamics of neurodegenerative disease https://arxiv.org/abs/2508.15046 #condmatsoft #qbioQM

Modelling the transmission and impact of Omicron variants of Covid-19 in different ethnicity groups in Aotearoa New Zealand https://arxiv.org/abs/2508.15077 #qbioPE

Equi-mRNA: Protein Translation Equivariant Encoding for mRNA Language Models https://arxiv.org/abs/2508.15103 #qbioQM #csAI

Implicitly and Differentiably Representing Protein Surfaces and Interfaces https://arxiv.org/abs/2508.11641 #qbioBM

HetSyn: Versatile Timescale Integration in Spiking Neural Networks via Heterogeneous Synapses https://arxiv.org/abs/2508.11644 #qbioNC #csLG

Memory as Structured Trajectories: Persistent Homology and Contextual Sheaves https://arxiv.org/abs/2508.11646 #qbioNC #nlinAO #csNE

Revealing Neurocognitive and Behavioral Patterns by Unsupervised Manifold Learning from Dynamic Brain Data https://arxiv.org/abs/2508.11672 #qbioNC #csAI #csLG

BeeNet: Reconstructing Flower Shapes from Electric Fields using Deep Learning https://arxiv.org/abs/2508.11724 #qbioQM #csCV

Multicellular control of gene networks https://arxiv.org/abs/2508.11783 #qbioMN

Binomial maps: stochastically evolving iterated integer maps for finite population https://arxiv.org/abs/2508.11974 #qbioPE #nlinCD #statAP

Towards interpretable prediction of recurrence risk in breast cancer using pathology foundation models https://arxiv.org/abs/2508.12025 #qbioTO

BConformeR: A Conformer Based on Mutual Sampling for Unified Prediction of Continuous and Discontinuous Antibody Binding Sites https://arxiv.org/abs/2508.12029 #qbioBM #csAI #csCE #csLG

Applied causality to infer protein dynamics and kinetics https://arxiv.org/abs/2508.12060 #physicsbioph #qbioBM

zERExtractor:An Automated Platform for Enzyme-Catalyzed Reaction Data Extraction from Scientific Literature https://arxiv.org/abs/2508.09995 #qbioBM #csET #csLG

Unifying equivalences across unsupervised learning, network science, and imaging/network neuroscience https://arxiv.org/abs/2508.10045 #qbioNC

An Intelligent Infrastructure as a Foundation for Modern Science https://arxiv.org/abs/2508.10051 #qbioNC #csET

SurgPub-Video: A Comprehensive Surgical Video Dataset for Enhanced Surgical Intelligence in Vision-Language Model https://arxiv.org/abs/2508.10054 #qbioOT

Large Language Models Show Signs of Alignment with Human Neurocognition During Abstract Reasoning https://arxiv.org/abs/2508.10057 #qbioNC #csAI #csCL

A Structural Analysis of Population Graphs https://arxiv.org/abs/2508.10058 #qbioQM

Excessive Screen Time is Associated with Mental Health Problems and ADHD in US Children and Adolescents: Physical Activity and Sleep as Parallel Mediators https://arxiv.org/abs/2508.10062 #qbioNC