arXiv Quantitative Biology @arxiv_bio@qoto.org

Stochastic clonal dynamics and genetic turnover in exponentially growing populations. (arXiv:2106.14236v1 [q-bio.PE]) http://arxiv.org/abs/2106.14236

Using deep learning to detect patients at risk for prostate cancer despite benign biopsies. (arXiv:2106.14256v1 [eess.IV]) http://arxiv.org/abs/2106.14256

Photoacoustic Silk Scaffolds for Neural stimulation and Regeneration. (arXiv:2106.14362v1 [q-bio.NC]) http://arxiv.org/abs/2106.14362

Cell types and ontologies of the Human Cell Atlas. (arXiv:2106.14443v1 [q-bio.CB]) http://arxiv.org/abs/2106.14443

An SIR-like kinetic model tracking individuals' viral load. (arXiv:2106.14480v1 [physics.soc-ph]) http://arxiv.org/abs/2106.14480

Blastocoel morphogenesis: a biophysics perspective. (arXiv:2106.14509v1 [q-bio.CB]) http://arxiv.org/abs/2106.14509

Modeling the Mistakes of Boundedly Rational Agents Within a Bayesian Theory of Mind. (arXiv:2106.13249v1 [cs.AI]) http://arxiv.org/abs/2106.13249

Pheno-Mapper: An Interactive Toolbox for the Visual Exploration of Phenomics Data. (arXiv:2106.13397v1 [cs.CG]) http://arxiv.org/abs/2106.13397

Unified modelling of epidemics by coupled dynamics via Monte-Carlo Markov Chain algorithms. (arXiv:2106.13463v1 [math.PR]) http://arxiv.org/abs/2106.13463

Alternating active-dormitive strategy enables overtaking by disadvantaged prey through Parrondo's paradox. (arXiv:2106.13527v1 [q-bio.PE]) http://arxiv.org/abs/2106.13527

A nonlinear hidden layer enables actor-critic agents to learn multiple paired association navigation. (arXiv:2106.13541v1 [cs.NE]) http://arxiv.org/abs/2106.13541

Fluctuating ecological networks: a synthesis of maximum entropy approaches for pattern and perturbation detection. (arXiv:2106.13565v1 [q-bio.QM]) http://arxiv.org/abs/2106.13565

Multi-scale Poisson process approaches for differential expression analysis of high-throughput sequencing data. (arXiv:2106.13634v1 [stat.ME]) http://arxiv.org/abs/2106.13634

SnakeLines: integrated set of computational pipelines for sequencing reads. (arXiv:2106.13649v1 [q-bio.GN]) http://arxiv.org/abs/2106.13649

A mechanism for sarcomere breathing: volume change and advective flow within the myofilament lattice. (arXiv:1904.12420v3 [q-bio.SC] UPDATED) http://arxiv.org/abs/1904.12420

Bifurcation Spiking Neural Network. (arXiv:1909.08341v3 [cs.NE] UPDATED) http://arxiv.org/abs/1909.08341

Clinical Named Entity Recognition using Contextualized Token Representations. (arXiv:2106.12608v1 [cs.CL]) http://arxiv.org/abs/2106.12608

An activation-clearance model for Plasmodium vivax malaria. (arXiv:2106.12823v1 [q-bio.PE]) http://arxiv.org/abs/2106.12823

Evaluation of deep lift pose models for 3D rodent pose estimation based on geometrically triangulated data. (arXiv:2106.12993v1 [cs.CV]) http://arxiv.org/abs/2106.12993

Towards Biologically Plausible Convolutional Networks. (arXiv:2106.13031v1 [cs.LG]) http://arxiv.org/abs/2106.13031