arXiv Quantitative Biology @arxiv_bio@qoto.org

FastFold: Reducing AlphaFold Training Time from 11 Days to 67 Hours. (arXiv:2203.00854v1 [cs.LG]) http://arxiv.org/abs/2203.00854

An Onsager-Machlup approach to the most probable transition pathway for a genetic regulatory network. (arXiv:2203.00864v1 [q-bio.MN]) http://arxiv.org/abs/2203.00864

Characterizing the organizational diversity of protein interaction networks across three domains of life. (arXiv:2203.00999v1 [q-bio.MN]) http://arxiv.org/abs/2203.00999

VaiPhy: a Variational Inference Based Algorithm for Phylogeny. (arXiv:2203.01121v1 [q-bio.PE]) http://arxiv.org/abs/2203.01121

libRoadRunner 2.0: A High-Performance SBML Simulation and Analysis Library. (arXiv:2203.01175v1 [q-bio.QM]) http://arxiv.org/abs/2203.01175

Combination of survival movement strategies in cyclic game systems during an epidemic. (arXiv:2203.00133v1 [q-bio.PE]) http://arxiv.org/abs/2203.00133

Nuclear Segmentation and Classification Model with Imbalanced Classes for CoNiC Challenge. (arXiv:2203.00171v1 [eess.IV]) http://arxiv.org/abs/2203.00171

The evolutionary stability of partial migration with Allee effects. (arXiv:2203.00321v1 [q-bio.PE]) http://arxiv.org/abs/2203.00321

Population games on dynamic community networks. (arXiv:2203.00371v1 [cs.SI]) http://arxiv.org/abs/2203.00371

Clustering Drives Cooperation on Reputation Networks, All Else Fixed. (arXiv:2203.00372v1 [cs.SI]) http://arxiv.org/abs/2203.00372

A Dynamical Estimation and Prediction for Covid19 on Romania using ensemble neural networks. (arXiv:2203.00407v1 [cs.LG]) http://arxiv.org/abs/2203.00407

Deep Learning based Prediction of MSI in Colorectal Cancer via Prediction of the Status of MMR Markers. (arXiv:2203.00449v1 [q-bio.QM]) http://arxiv.org/abs/2203.00449

Multi-Objective Latent Space Optimization of Generative Molecular Design Models. (arXiv:2203.00526v1 [cs.LG]) http://arxiv.org/abs/2203.00526

Self-Supervised Vision Transformers Learn Visual Concepts in Histopathology. (arXiv:2203.00585v1 [cs.CV]) http://arxiv.org/abs/2203.00585

Parameter estimation for WMTI-Watson model of white matter using encoder-decoder recurrent neural network. (arXiv:2203.00595v1 [physics.med-ph]) http://arxiv.org/abs/2203.00595

A stochastic household model for vector-borne diseases. (arXiv:2202.12893v1 [q-bio.PE]) http://arxiv.org/abs/2202.12893

Spatially distributed computation in cortical circuits. (arXiv:2202.12955v1 [q-bio.NC]) http://arxiv.org/abs/2202.12955

Deep Neural Network for Automatic Assessment of Dysphonia. (arXiv:2202.12957v1 [eess.AS]) http://arxiv.org/abs/2202.12957

Decomposing past and future: Integrated information decomposition based on shared probability mass exclusions. (arXiv:2202.12992v1 [q-bio.NC]) http://arxiv.org/abs/2202.12992

SBbadger: Biochemical Reaction Networks with Definable Degree Distributions. (arXiv:2202.13004v1 [q-bio.MN]) http://arxiv.org/abs/2202.13004