arXiv Quantitative Biology @arxiv_bio@qoto.org

A Survey of Generative AI for De Novo Drug Design: New Frontiers in Molecule and Protein Generation https://arxiv.org/abs/2402.08703 #qbioBM #csAI #csLG

DNABERT-S: Learning Species-Aware DNA Embedding with Genome Foundation Models https://arxiv.org/abs/2402.08777 #qbioGN #csAI #csCE #csCL

WGTDA: A Topological Perspective to Biomarker Discovery in Gene Expression Data https://arxiv.org/abs/2402.08807 #qbioQM

Cosmic radiation drives quasi-periodic changes in the diversity of siliceous marine microplankton https://arxiv.org/abs/2402.09163 #physicsaoph #astrophEP #astrophGA #astrophHE #qbioPE

A general mechanism for enhancer-insulator pairing reveals heterogeneous dynamics in long-distant 3D gene regulation https://arxiv.org/abs/2402.09209 #condmatstatmech #physicsbioph #qbioMN #qbioQM

3D-based RNA function prediction tools in rnaglib https://arxiv.org/abs/2402.09330 #qbioBM #csLG

Leveraging cough sounds to optimize chest x-ray usage in low-resource settings https://arxiv.org/abs/2402.08789 #eess.AS #qbioQM #cs.AI #cs.LG

Improving Molecule Generation and Drug Discovery with a Knowledge-enhanced Generative Model https://arxiv.org/abs/2402.08790 #qbioQM #cs.LG

Deep and shallow data science for multi-scale optical neuroscience https://arxiv.org/abs/2402.08811 #eess.IV #qbioQM #cs.LG

evolSOM: an R Package for evolutionary conservation analysis with SOMs https://arxiv.org/abs/2402.07948 #qbioQM #qbioPE #csLG

Optimizing the Design of an Artificial Pancreas to Improve Diabetes Management https://arxiv.org/abs/2402.07949 #qbioQM #csAI #csLG #csNE

ProtIR: Iterative Refinement between Retrievers and Predictors for Protein Function Annotation https://arxiv.org/abs/2402.07955 #qbioBM #csLG

Efficient and Scalable Fine-Tune of Language Models for Genome Understanding https://arxiv.org/abs/2402.08075 #qbioGN #csAI #csLG

PSC-CPI: Multi-Scale Protein Sequence-Structure Contrasting for Efficient and Generalizable Compound-Protein Interaction Prediction https://arxiv.org/abs/2402.08198 #qbioBM #csAI #csLG

Computing Threshold Circuits with Void Reactions in Step Chemical Reaction Networks https://arxiv.org/abs/2402.08220 #qbioMN #csET

Persistence diagrams for exploring the shape variability of abdominal aortic aneurysms https://arxiv.org/abs/2402.07966 #physics.med-ph #qbioQM

Integrating MLSecOps in the Biotechnology Industry 5.0 https://arxiv.org/abs/2402.07967 #qbioQM #cs.CR

Semantic segmentation for recognition of epileptiform patterns recorded via Microelectrode Arrays in vitro https://arxiv.org/abs/2402.08099 #eess.SP #qbioNC

A Universal Non-Parametric Approach For Improved Molecular Sequence Analysis https://arxiv.org/abs/2402.08117 #qbioQM #cs.LG

CLIPZyme: Reaction-Conditioned Virtual Screening of Enzymes https://arxiv.org/abs/2402.06748 #qbioQM