arXiv Quantitative Biology @arxiv_bio@qoto.org

FoldToken: Learning Protein Language via Vector Quantization and Beyond https://arxiv.org/abs/2403.09673 #qbioBM #csAI #csLG

A Quasi-Stationary Approach to Metastability in a System of Spiking Neurons with Synaptic Plasticity https://arxiv.org/abs/2403.09678 #qbioNC #mathPR

Understanding data analysis aspects of TMS-EEG in clinical study: a mini review and a case study with open dataset https://arxiv.org/abs/2403.09707 #qbioNC

Texture Recognition Using a Biologically Plausible Spiking Phase-Locked Loop Model for Spike Train Frequency Decomposition https://arxiv.org/abs/2403.09723 #qbioNC

The Impact of Time Delay on Mutant Fixation in Evolutionary Games https://arxiv.org/abs/2403.09864 #qbioPE

Thalamocortical interactions shape hierarchical neural variability during stimulus perception https://arxiv.org/abs/2403.09965 #qbioNC

Modeling the Spread of COVID-19 in University Communities https://arxiv.org/abs/2403.10402 #physicssocph #qbioPE

Nuclear compensatory evolution driven by mito-nuclear incompatibilities https://arxiv.org/abs/2403.10411 #qbioPE

An Improved Metric and Benchmark for Assessing the Performance of Virtual Screening Models https://arxiv.org/abs/2403.10478 #qbioQM

Overcompensation of transient and permanent death rate increases in age-structured models with cannibalistic interactions https://arxiv.org/abs/2303.00864 #qbioPE #qbioQM

scVGAE: A Novel Approach using ZINB-Based Variational Graph Autoencoder for Single-Cell RNA-Seq Imputation https://arxiv.org/abs/2403.08959 #qbioGN #csCE

Lightning-fast adaptive immune receptor similarity search by symmetric deletion lookup https://arxiv.org/abs/2403.09010 #qbioQM #qbioGN

Anatomically aware simulation of patient-specific glioblastoma xenografts https://arxiv.org/abs/2403.09182 #qbioQM #qbioTO

Emergent time scales of epistasis in protein evolution https://arxiv.org/abs/2403.09436 #condmatdisnn #qbioBM #qbioPE

Cultural evolution in populations of Large Language Models https://arxiv.org/abs/2403.08882 #qbioPE #cs.MA #cs.AI

From "um" to "yeah": Producing, predicting, and regulating information flow in human conversation https://arxiv.org/abs/2403.08890 #math.IT #qbioNC #cs.CL #cs.IT

Morphological instability at topological defects in a three-dimensional vertex model for spherical epithelia https://arxiv.org/abs/2403.08954 #physicsbioph #condmatsoft #qbioTO

Are Vision Language Models Texture or Shape Biased and Can We Steer Them? https://arxiv.org/abs/2403.09193 #qbioNC #cs.CV #cs.AI #cs.LG

Breast Cancer Classification Using Gradient Boosting Algorithms Focusing on Reducing the False Negative and SHAP for Explainability https://arxiv.org/abs/2403.09548 #qbioQM #cs.LG

Characterization of Polarimetric Properties in Various Brain Tumor Types Using Wide-Field Imaging Mueller Polarimetry https://arxiv.org/abs/2403.09561 #physics.med-ph #qbioTO