arXiv Quantitative Biology @arxiv_bio@qoto.org

F$^3$low: Frame-to-Frame Coarse-grained Molecular Dynamics with SE(3) Guided Flow Matching https://arxiv.org/abs/2405.00751 #qbioQM #csAI #csLG

HMAMP: Hypervolume-Driven Multi-Objective Antimicrobial Peptides Design https://arxiv.org/abs/2405.00753 #qbioQM #csAI

A Simple Comparison of Biochemical Systems Theory and Metabolic Control Analysis https://arxiv.org/abs/2405.00810 #qbioMN #qbioQM #qbioSC

Cross-modality Matching and Prediction of Perturbation Responses with Labeled Gromov-Wasserstein Optimal Transport https://arxiv.org/abs/2405.00838 #qbioGN #mathOC

Correcting Biased Centered Kernel Alignment Measures in Biological and Artificial Neural Networks https://arxiv.org/abs/2405.01012 #qbioNC #csCV

Qualia and the Formal Structure of Meaning https://arxiv.org/abs/2405.01148 #physicshistph #qbioNC #mathCT #csAI

Anti-seizure medication tapering is associated with delta band power reduction in a dose, region and time-dependent manner https://arxiv.org/abs/2405.01385 #qbioNC

Exploring mechanisms of Neural Robustness: probing the bridge between geometry and spectrum https://arxiv.org/abs/2405.00679 #qbioNC #cs.NE #cs.AI

EEG-Deformer: A Dense Convolutional Transformer for Brain-computer Interfaces https://arxiv.org/abs/2405.00719 #eess.SP #qbioNC #cs.LG

Bayesian-Guided Generation of Synthetic Microbiomes with Minimized Pathogenicity https://arxiv.org/abs/2405.00070 #qbioQM #csAI

Target-Specific De Novo Peptide Binder Design with DiffPepBuilder https://arxiv.org/abs/2405.00128 #qbioBM

Heterogeneity analysis provides evidence for a genetically homogeneous subtype of bipolar-disorder https://arxiv.org/abs/2405.00159 #qbioGN

Reliability and predictability of phenotype information from functional connectivity in large imaging datasets https://arxiv.org/abs/2405.00255 #qbioNC

Reevaluating coexistence and stability in ecosystem networks to address ecological transients: methods and implications https://arxiv.org/abs/2405.00333 #qbioPE #statAP

3D MR Fingerprinting for Dynamic Contrast-Enhanced Imaging of Whole Mouse Brain https://arxiv.org/abs/2405.00513 #qbioQM

The Highly Durable Antibacterial Gel-like Coatings for Textiles https://arxiv.org/abs/2405.00530 #qbioTO

New Trends on the Systems Approach to Modeling SARS-CoV-2 Pandemics in a Globally Connected Planet https://arxiv.org/abs/2405.00541 #physicssocph #qbioPE #nlinAO

Complex contagions can outperform simple contagions for network reconstruction with dense networks or saturated dynamics https://arxiv.org/abs/2405.00129 #qbioPE #statML #cs.SI

Discovering intrinsic multi-compartment pharmacometric models using Physics Informed Neural Networks https://arxiv.org/abs/2405.00166 #qbioQM #cs.LG #cs.AI

Leak Proof CMap; a framework for training and evaluation of cell line agnostic L1000 similarity methods https://arxiv.org/abs/2404.18960 #qbioQM #csLG