arXiv Quantitative Biology @arxiv_bio@qoto.org

Large deviation principles and evolutionary multiple structure alignment of non-coding RNA https://arxiv.org/abs/2405.14904 #qbioOT

PILOT: Equivariant diffusion for pocket conditioned de novo ligand generation with multi-objective guidance via importance sampling https://arxiv.org/abs/2405.14925 #qbioBM #csAI #csCE #csLG

An Update to the SBML Human-Readable Antimony Language https://arxiv.org/abs/2405.15109 #qbioQM #qbioMN

ProtFAD: Introducing function-aware domains as implicit modality towards protein function perception https://arxiv.org/abs/2405.15158 #qbioBM #csLG

Maximum Caliber Infers Effective Coupling and Response from Spiking Networks https://arxiv.org/abs/2405.15206 #physicsbioph #qbioNC

Dynamical behavior of Predator-Prey with Allee Effect on Both Populations and Disease in Predator https://arxiv.org/abs/2405.15448 #qbioPE #mathDS

Out of Many, One: Designing and Scaffolding Proteins at the Scale of the Structural Universe with Genie 2 https://arxiv.org/abs/2405.15489 #qbioBM #csLG

Knowledge-enhanced Relation Graph and Task Sampling for Few-shot Molecular Property Prediction https://arxiv.org/abs/2405.15544 #qbioQM #csAI #csLG

Compound Mutations in the Abl1 Kinase Cause Inhibitor Resistance by Shifting DFG Flip Mechanisms and Relative State Populations https://arxiv.org/abs/2405.14968 #physicsbioph #qbioBM

The miscalibration of the honeybee odometer https://arxiv.org/abs/2405.12998 #physicsbioph #qbioOT

Robustly encoding certainty in a metastable neural circuit model https://arxiv.org/abs/2405.13182 #qbioNC #nlinPS

Jump-Switch-Flow: hybrid stochastic-deterministic solutions of compartmental models https://arxiv.org/abs/2405.13239 #qbioPE #mathDS

Lessons to learn for better safeguarding of genetic resources during tree pandemics: the case of ash dieback in Europe https://arxiv.org/abs/2405.13305 #qbioPE

A theory of neural emulators https://arxiv.org/abs/2405.13394 #qbioNC #csAI

Range-Limited Heaps' Law for Functional DNA Words in the Human Genome https://arxiv.org/abs/2405.13825 #qbioGN

HoverFast: an accurate, high-throughput, clinically deployable nuclear segmentation tool for brightfield digital pathology images https://arxiv.org/abs/2405.14028 #qbioQM

DendroPy 5: a mature Python library for phylogenetic computing https://arxiv.org/abs/2405.14120 #qbioPE

Contribute to balance, wire in accordance: Emergence of backpropagation from a simple, bio-plausible neuroplasticity rule https://arxiv.org/abs/2405.14139 #qbioNC #csLG #csNE

ReactXT: Understanding Molecular "Reaction-ship" via Reaction-Contextualized Molecule-Text Pretraining https://arxiv.org/abs/2405.14225 #qbioQM #csCL #csMM

Unraveling the Autism spectrum heterogeneity: Insights from ABIDE I Database using data/model-driven permutation testing approaches https://arxiv.org/abs/2405.12225 #qbioQM #eessIV #eessSP #csLG