arXiv Quantitative Biology @arxiv_bio@qoto.org

FLOWR.root: A flow matching based foundation model for joint multi-purpose structure-aware 3D ligand generation and affinity prediction https://arxiv.org/abs/2510.02578 #qbioBM #csLG

Accurate linear modeling of EEG-based cortical activity during a passive motor task with input: a sub-space identification approach https://arxiv.org/abs/2510.02596 #qbioNC

SAE-RNA: A Sparse Autoencoder Model for Interpreting RNA Language Model Representations https://arxiv.org/abs/2510.02734 #qbioBM #qbioGN #csAI

Dynamics of memory B cells and plasmablasts in healthy individuals https://arxiv.org/abs/2510.02812 #qbioPE

Pyk2 plays a critical role in synaptic dysfunction during the early stages of Alzheimer's disease https://arxiv.org/abs/2510.02824 #qbioNC

The land use-climate change-biodiversity nexus in European islands stakeholders https://arxiv.org/abs/2510.02829 #qbioPE #csLG

The Principle of Isomorphism: A Theory of Population Activity in Grid Cells and Beyond https://arxiv.org/abs/2510.02853 #qbioNC

DNABERT-2: Fine-Tuning a Genomic Language Model for Colorectal Gene Enhancer Classification https://arxiv.org/abs/2509.25274 #qbioGN #csAI #csLG

Mathematical Framework for Epidemic Dynamics: Optimal Control and Global Sensitivity Analysis https://arxiv.org/abs/2509.25291 #qbioPE #mathDS

Computational Drug Repurposing for Alzheimer's Disease via Sheaf Theoretic Population-Scale Analysis of snRNA-seq Data https://arxiv.org/abs/2509.25417 #qbioMN

Neural Receptive Fields, Stimulus Space Embedding and Effective Geometry of Scale-Free Networks https://arxiv.org/abs/2509.25453 #qbioNC

Discontinuous Epitope Fragments as Sufficient Target Templates for Efficient Binder Design https://arxiv.org/abs/2509.25479 #qbioBM #csAI

A Mathematical Model of Hematopoiesis during Systemic Infection https://arxiv.org/abs/2509.25485 #qbioCB

Load Transfer along Continuous Collagen Fibers Reduces the Importance of Wall Thickness Variations https://arxiv.org/abs/2509.25501 #qbioTO

Continuum models describing probabilistic motion of tagged agents in exclusion processes https://arxiv.org/abs/2509.25554 #qbioPE

GenVarFormer: Predicting gene expression from long-range mutations in cancer https://arxiv.org/abs/2509.25573 #qbioGN

What does the tree of life look like as it grows? Evolution and the multifractality of time https://arxiv.org/abs/2509.25615 #physicsbioph #qbioPE #mathDS #mathPR

Assessing metadata privacy in neuroimaging https://arxiv.org/abs/2509.15278 #qbioOT #eessIV #csCR #csCY

Epidemic amplification by correlated superspreading https://arxiv.org/abs/2509.15338 #qbioPE

Incorporating Visual Cortical Lateral Connection Properties into CNN: Recurrent Activation and Excitatory-Inhibitory Separation https://arxiv.org/abs/2509.15460 #qbioNC #csAI #csCV