arXiv Quantitative Biology @arxiv_bio@qoto.org

fastbmRAG: A Fast Graph-Based RAG Framework for Efficient Processing of Large-Scale Biomedical Literature https://arxiv.org/abs/2511.10014 #qbioQM #csAI

Biodose Tools updates for criticality accidents and interlaboratory comparisons https://arxiv.org/abs/2511.07497 #qbioQM

Inferring Hidden Motives: Bayesian Models of Preference Learning in Repeated Dictator Games https://arxiv.org/abs/2511.07825 #qbioNC

Matters of Life and Death in Computational Cell Biology https://arxiv.org/abs/2511.07847 #qbioCB #mathDS

Advancing credibility and transparency in brain-to-image reconstruction research: Reanalysis of Koide-Majima, Nishimoto, and Majima (Neural Networks, 2024) https://arxiv.org/abs/2511.07960 #qbioNC

Direction and speed selectivity properties for spatio-temporal receptive fields according to the generalized Gaussian derivative model for visual receptive fields https://arxiv.org/abs/2511.08101 #qbioNC

Distance by de-correlation: Computing distance with heterogeneous grid cells https://arxiv.org/abs/2511.08292 #qbioNC

PHD-MS: Multiscale Domain Identification for Spatial Transcriptomics via Persistent Homology https://arxiv.org/abs/2511.08411 #qbioQM

Cognition as least action: the Physarum Lagrangian https://arxiv.org/abs/2511.08531 #physicsbioph #qbioNC #mathOC #qbioCB

TrackStudio: An Integrated Toolkit for Markerless Tracking https://arxiv.org/abs/2511.07624 #qbioQM #cs.CV

Understanding Electro-communication and Electro-sensing in Weakly Electric Fish using Multi-Agent Deep Reinforcement Learning https://arxiv.org/abs/2511.08436 #eess.SY #qbioNC #cs.NE #cs.AI #cs.MA #cs.SY

EARS-UDE: Evaluating Auditory Response in Sensory Overload with Universal Differential Equations https://arxiv.org/abs/2510.26804 #qbioNC #csAI

Molecular glues stabilize water-mediated hydrogen bonds in ternary complexes https://arxiv.org/abs/2510.26806 #qbioBM

Neurons as Detectors of Coherent Sets in Sensory Dynamics https://arxiv.org/abs/2510.26955 #qbioNC

Generalizing matrix representations to fully heterochronous ranked tree shapes https://arxiv.org/abs/2510.27030 #qbioPE #mathCO

How Do Proteins Fold? https://arxiv.org/abs/2510.27074 #condmatmeshall #condmatsoft #qbioBM

Streptococcosis in aquaculture: Advances, challenges, and future directions in disease control and prevention https://arxiv.org/abs/2510.27354 #qbioPE

A Sensing Whole Brain Zebrafish Foundation Model for Neuron Dynamics and Behavior https://arxiv.org/abs/2510.27366 #qbioNC

The transitional kinetics between open and closed Rep structures can be tuned by salt via two intermediate states https://arxiv.org/abs/2510.27539 #qbioBM

Effects of Model Reduction on Coherence and Information Transfer in Stochastic Biochemical Systems https://arxiv.org/abs/2510.27600 #qbioMN