arXiv Quantitative Biology @arxiv_bio@qoto.org

Bio-plausible Neuromorphic Disturbance Observer Based on Emulation Theory: Extended Version https://arxiv.org/abs/2606.05189 #qbioNC #csNE

Uniform sampling of canalizing Boolean functions reveals hidden biases in Boolean network analysis https://arxiv.org/abs/2606.05196 #qbioMN #mathCO

An accurate nucleic acid-small molecule docking framework via geometric deep learning with large-scale pretraining https://arxiv.org/abs/2606.05198 #qbioBM #csLG

Ontology-constrained multi-LLM scoring of hypothesis support in the predictive processing literature https://arxiv.org/abs/2606.05206 #qbioNC #statAP #csAI

The Language of Elution: Autoregressive Prediction of the Next Feature in Untargeted LC-HRMS Lipidomics https://arxiv.org/abs/2606.05225 #qbioQM #csLG

Quantifying the biophysical properties of stomatocytes in health and disease https://arxiv.org/abs/2606.05227 #qbioCB #mathph #mathMP #qbioBM #csLG

AlloGen: Conformation-Selective Binder Generation with Differential State Scoring https://arxiv.org/abs/2606.05474 #qbioBM #csLG

Cross-scale spatially-aware generative modeling of transcriptomic programs underlying neurodegenerative brain organization https://arxiv.org/abs/2606.05870 #qbioNC #qbioQM #csLG

Federated SPARQL querying for genomic variant functional annotation https://arxiv.org/abs/2606.05918 #qbioQM

On the Promises and Limits of Multi-omics Integration for Deconvolution: The HADACA3 Benchmark https://arxiv.org/abs/2606.05980 #qbioQM

Oxygenation and spatial heterogeneity shape radiotherapy protocol ranking through phenotypic adaptation https://arxiv.org/abs/2606.04004 #qbioTO #qbioPE

The Variance Brain Foundation Models Forgot: Third-Order Statistics Predict Cognition Where Billion-Parameter Models Fail https://arxiv.org/abs/2606.04010 #qbioNC #csAI

Towards an Ideometrics-Based Understanding of Consciousness, Time, Space and Dreams https://arxiv.org/abs/2606.04011 #qbioNC

SpliceBind: Isoform-Aware Prediction of Binding Pocket Druggability https://arxiv.org/abs/2606.04020 #qbioQM #csLG

Structure-Aware Prediction of PROTAC-Mediated Protein Degradability via Graph Neural Networks https://arxiv.org/abs/2606.04021 #qbioQM #csLG

SC-TauPath: A Structural Connectivity Attribution Framework for Mapping Tau Propagation Pathways in Alzheimer's Disease https://arxiv.org/abs/2606.04066 #qbioNC #csLG

EpiFormer: Learning Antigen-Antibody Interactions for Epitope Prediction via Geometric Deep Learning https://arxiv.org/abs/2606.04154 #qbioQM #csLG

An Octahedral Fibrous Constitutive Model for Heart Valve Mechanics and Function https://arxiv.org/abs/2606.04234 #qbioTO

Discrete signaling mediates chaotic regularization in recurrent neural networks https://arxiv.org/abs/2606.04426 #condmatdisnn #qbioNC

Quasi-birth-and-death processes evolving within trees: Applications to comparative phylogenetics https://arxiv.org/abs/2606.04551 #qbioPE #mathPR