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@askennard When seminars went online during UK COVID lockdowns I noticed a much greater range of people asking questions than in person.
At least in part this was due to being able to type and edit a question - which helps with formulating the question more clearly - and having that extra thinking time in a space where people aren't looking at you.

Even when people were then called to read out their questions by the chair there was still an increase in students asking questions

@askennard some of the improvement was through the tech, so there might be ways to build on that in person, still.

Perhaps one option is to use something like Mentimeter during the seminar, so that the host can see questions coming in from everyone.

Some of the improvement was from the change in the culture that came from seeing this model bed in and be supported by the chairs, speakers and attendees.

Plans to increase participation need continuing input and support week after week

@Retropz you’re absolutely right that continuous support and a consistent format would help. I think this was the root problem at the recent seminar that got me thinking about this: the host didn’t mention that he would ask for a question from students until immediately before. It felt like an afterthought. To everyone’s surprise this didn’t work! 🙄

@MarkHanson @JoseEdGomes this is a fantastic idea! I’m going to try to suggest it to folks in my dept.

Who would have thought that techniques for effective teaching would work in a seminar???

@askennard @JoseEdGomes I 've liked the spirit of the system at my current uni, where the format is: "as always, we'll pause 30s so you can chat to your neighbour, and then we'll take questions with first from students."

The 30s pause is nice. It gives a chance for ideas to formalize, and maybe boost student confidence to ask that question if they ask their neighbour and their neighbour is like "oh... huh yeah I dunno. You should ask."

And by “not succeed,” I mean an awkward pause followed by the host relenting and letting a faculty member ask a question.

I know that waiting longer can help, but as a trainee that awkward pause stresses me out and interferes with my thinking of a question to ask!

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Does anyone else find that the well-meaning trend in seminar of “first question from a student” tends not to succeed?

My proposal: THIRD question must be from a student.

Students usually need time to process the talk and build up the courage/conviction to ask it. And once faculty get the ball rolling it feels easier to raise your hand. I think it’s on hosts to check the vibe partway through and explicitly ask for students to talk, but at the start never seems to work well.

@askennard

In this preprint, we identified a conserved or suspiciously structurally similar interface between a large highly conserved well-folded protein and its fast-evolving co-factors in yeast and humans. Some of the co-factors are large, but all of them consist primarily of disordered regions.

biorxiv.org/content/10.1101/20

We are now using alpha fold to predict protein-protein interactions amongst proteins that are linked to these ones via phenomics.

#StructurePredictions #Phenomics

@MCDuncanLab so cool! I am still just figuring out what can be done so I’m excited to see what you do with this

@MCDuncanLab also curious if these are mutants, or complexes, or super big proteins? I’ve been so grateful that Uniprot has already AlphaFolded every protein in the Naegleria genome (and most model organisms) so I actually haven’t had to wait for anything I’ve needed yet!

@christlet I’ve had luck with a recipe with broccoli as the base, which definitely counts as veggies!

Wow. Ordering the free #Covid home tests was pleasantly _not_ painful at all. Almost tooo easy for a government process...🤔

covid.gov/tests

@vsbuffalo This is such a cool idea I'm looking into getting it going on my current project!

I was wondering how you would recommend treating symbolic links to data. I have some large, locally stored datasets that I am using for different projects. To save disk space while making it clear what datasets are being used in each project, I put symbolic links to the dataset into a data subdirectory of each project where the data is needed.

I'm guessing that I should add the original locations of the data to each SDF repository that uses the data? I am also thinking that SDF will help a lot with this workflow!

Hello #science Mastodon friends! I’m a postdoc at University of Geneva studying #membrane remodeling with #invitro #reconstitution cell biology tools. I love fluorescence #microscopy and #em. 
At the moment I’m actively studying #clathrin, #actin and #eisosome. I want to know more about membrane lipids and how they affect on membrane properties, protein functions and how membrane is deforming. #introduction

@askennard @CellySally @steveroyle @the_node
Thanks for the feedback, we'll definitely look into options for different platforms.

@CellySally @steveroyle @focalplane_jcs @the_node very cool! I just signed up for the FocalPlane network. I noticed that they have a spot for a Twitter handle but not for Mastodon ☹️. Probably an irritating change to make but I hope they can consider it for the future!

#Microscopy and #Imaging people of Mastodon! Have you heard about the FocalPlane Network run by @focalplane_jcs ?

The idea is to build a network of people into imaging (maybe cell biologists, or microscope builders, image analysts etc). This is so that of people need a speaker or panel member with expertise, they can find someone. If you are happy to, you can other info e.g. gender, race/ethnicity, LGBTQ+ identity and disability status, to help diversify conferences and other opportunities.

Registration is now open for our 2024 Journal Meeting 'Diversity and Evolution in Cell Biology' organised by Gautam Dey
@gautamdey, Lillian Fritz-Laylin, Snezhka Oliferenko, Meg Titus & Michael Way. View speakers & apply at: biologists.com/meetings/jcsevo

#CellBiology #Evolution #JCSevocellbio

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