Clément Goubert 
@clementgoubert@qoto.org
- Personal Website
- https://www.clementgoubert.com
- Github
- https://github.com/clemgoub
- TE-hub
- https://tehub.org
Evolutionary Biology, Bioinformatics, #Transposons
Research Associate // Bourque Group // McGill, Canada
Joined Nov 2022
Insights into mammalian TE diversity through the curation of 248 genome assemblies https://www.science.org/doi/10.1126/science.abn1430#.ZFEdDQyAPFg.twitter
Relating enhancer genetic variation across mammals to complex phenotypes using machine learning https://www.science.org/doi/10.1126/science.abm7993#.ZFEc8vGDQGE.twitter
I ♥️ 🛏️⚒️ !
---
RT @aaronquinlan
It's been a while, but version 2.31.0 of #bedtools is out!
This includes a new "summary" command for basic stats, sanity checks, and QC on interval files.
It also supports gzipped FASTA files. Thanks to @brent_p, @38, @jomarnz for their contributions. https://bedtools.readthedocs.io/en/latest/content/tools/summary.html
https://twitter.com/aaronquinlan/status/1651954456714694656
RT @transposlav
A Ukrainian PhD student here searching for a place abroad to finish the experimental part of her PhD thesis. She's specialized in MolBiol, RNA-biology, neuroscience; but she is willing to adjust the topic according to the hosting lab.
Does anyone have a lead? https://twitter.com/OctavianAnima/status/1642864908491423744
RT @BrancoLab
It is finally out (in a peer-reviewed journal)! Our contribution to teasing out human placental gene regulation by #ERVs. Led by the awesome @neverlethetruth.
https://www.nature.com/articles/s41594-023-00960-6
RT @alexander_suh
Come join us in Bonn on an exciting and fully funded PhD position! https://twitter.com/astrid_boehne/status/1635633868110721025
RT @drjulie_b
I’m not gonna say it https://twitter.com/sciencefunn/status/1638998511088979973
RT @hub_te
#TEhub update, tomorrow: Wednesday the 8th at 9a PST // 12p EST // 6p CEST
You can find the Zoom link in the #te-hub channel on TransposonsWorldwide Slack.
Join us to discuss developments of #transposon resources for TE Hub #transposon
What the hell!!! 🤯
---
RT @CedricFeschotte
This cutie is the Antarctic krill. Its genome is 48 Gb, 15x the human genome! 92% repeats! CMC/CACTA elements, an enigmatic and relatively rare group of DNA transposons in other animals, alone account for 42%!! Why these and why in krill?…🤔😯🤯
https://www.cell.com/cell/fulltext/S0092-8674(23)00107-1
https://twitter.com/CedricFeschotte/status/1631760070596755462
Evolution of the germline mutation rate across vertebrates https://www.nature.com/articles/s41586-023-05752-y#citeas
RT @HarmitMalik
I’m putting this disclaimer in all my preprints from now on
Congrats @OggenfussUrsula et al!
#PLOSPathogens: Recent transposable element bursts are associated with the proximity to genes in a fungal pla ... https://dx.plos.org/10.1371/journal.ppat.1011130
Stop everything and read this 👇(especially if "gene enrichment analysis" rings a 🔔)
---
RT @mdziemann
I want to talk today about a methodological issue in #genomics research that has been around a long time but is still a major problem.
The reason is that today I reviewed another manuscript that has this exact problem.
https://twitter.com/mdziemann/status/1626407797939384320
🌿👾 #plant #transposon friends: I'm looking for a good dataset to benchmark a program detecting insertion polymorphisms. Ideally the samples would have different type of raw sequencing (long+short reads), and a trusted list of known insertion polymorphisms. Open to collab! 🤝
Reproducible evaluation of short-read transposable element detectors and species-wide data mining of insertion patterns in yeast https://www.biorxiv.org/content/10.1101/2023.02.13.528343v1
RT @GonzalezLab_BCN
Thanks to @GonzalezLab_BCN present and past members, the @ERC_Research, @Dros_EU, @LCATMon and all the students, teachers, and citizens of #MelanogasterCTF! for promoting the role of #WomenAndGirlsInScience! https://twitter.com/ERC_Research/status/1624741579218120705
Highly recommended!!!
---
RT @guilbourque
Come work with us this summer! https://twitter.com/c3genomics/status/1622626415362310144
https://twitter.com/guilbourque/status/1622646034030596097
RT @hub_te
DATE CHANGE!!! Next #TEhub update: Wednesday February the 8th (9AM PST // 12AM EST // 6PM CEST)
You can find the Zoom link in the #te-hub channel on TransposonsWorldwide Slack.
Join us to discuss developments of #transposon resources for TE Hub #transposon
- Personal Website
- https://www.clementgoubert.com
- Github
- https://github.com/clemgoub
- TE-hub
- https://tehub.org
Evolutionary Biology, Bioinformatics, #Transposons
Research Associate // Bourque Group // McGill, Canada
Joined Nov 2022
