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There 1 week to apply for the PhD studentship in my lab (4 years, paid as an RA, fees at UK rate) to contribute to understanding how the brain constructs auditory space. shorturl.at/adoJN

Post will require great coding skills so background in engineering, datasciences or neuroscience is ideal!

#datascience #neuroscience #PhdStudentship

In press! 📣 The surprising result that basolateral amygdala has a more crucial role in learning meaningful changes in the reward environment than orbitofrontal cortex. Check our paper to find out how! 🤓 #neuroscience #CompNeuro jneurosci.org/content/early/20

Dissociable contributions of basolateral amygdala and ventrolateral orbitofrontal cortex to flexible learning under uncertainty

Reversal learning measures the ability to form flexible associations between choice outcomes with stimuli and actions that precede them. This type of learning is thought to rely on several cortical and subcortical areas, including highly interconnected orbitofrontal cortex (OFC) and basolateral amygdala (BLA), and is often impaired in various neuropsychiatric and substance use disorders. However, unique contributions of these regions to stimulus- and action-based reversal learning have not been systematically compared using a chemogenetic approach and particularly before and after the first reversal that introduces new uncertainty. Here, we examined the roles of ventrolateral OFC (vlOFC) and BLA during reversal learning. Male and female rats were prepared with inhibitory DREADDs targeting projection neurons in these regions and tested on a series of deterministic and probabilistic reversals during which they learned about stimulus identity or side (left or right) associated with different reward probabilities. Using a counterbalanced within-subject design, we inhibited these regions prior to reversal sessions. We assessed initial and pre-post reversal changes in performance to measure learning and adjustments to reversals, respectively. We found that inhibition of vlOFC, but not BLA, eliminated adjustments to stimulus-based reversals. Inhibition of BLA, but not vlOFC, selectively impaired action-based probabilistic reversal learning, leaving deterministic reversal learning intact. vlOFC exhibited a sex-dependent role in early adjustment to action-based reversals, but not in overall learning. These results reveal dissociable roles for BLA and vlOFC in flexible learning and highlight a more crucial role for BLA in learning meaningful changes in the reward environment. Significance Statement Inflexible learning is a feature of several neuropsychiatric disorders. We investigated how the ventrolateral orbitofrontal cortex (vlOFC) and basolateral amygdala (BLA) are involved in learning of stimuli or actions under reinforcement uncertainty. Following chemogenetic inhibition of these regions in both male and females, we measured learning and adjustments to deterministic and probabilistic reversals. For action learning, BLA, but not vlOFC, is needed for probabilistic reversal learning. However, BLA is not necessary for initial probabilistic learning or retention, indicating a critical role for learning of unexpected changes. For stimulus learning, vlOFC, but not BLA, is required for adjustments to reversals, particularly in females. These findings provide insight into the complementary cortico-amygdalar substrates of learning under different forms of uncertainty.

www.jneurosci.org

Why is the SFN itinerary planner so bad? I spent some time this morning adding things awkwardly, and now I have downloaded the mobile app and it doesn't sync?!??!

Anyone coming to #sfn? Come along to our @brainglobe poster on Wednesday afternoon, or get in touch to chat about BrainGlobe or any of our other projects (neuroinformatics.dev).

#SfN2023 #Neuroscience

Do you want to do a postdoc in London at the fabulous @SWC_Neuro ?

Do you have expertise in rodent behavior, neurophysiology and/or imaging?

Are you interested in economics? decision-making? Multiplayer games?

Get in touch! I will be at SFN and would love to come to your poster/talk.

erlichlab.org
sainsburywellcome.org

please boost and forward to anyone who might be interested.

#Nature Neural signal propagation atlas of Caenorhabditis elegans nature.com/articles/s41586-023 "23,433 pairs of neurons across the head of the nematode Caenorhabditis elegans. Signal propagation differs from model predictions that are based on anatomy. Extrasynaptic signalling not visible from anatomy contributes to this difference. Extrasynaptically released neuropeptides serve a similar function to that of classical neurotransmitters. Both synaptic and extrasynaptic signalling drive neural dynamics on short timescales."

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Jonny Lovelace, Jingrui Ma, ... and Vinny Augustine discovered the vagal pathway underlying fainting, really exciting work, summarized here: nature.com/articles/d41586-023 , full paper here: nature.com/articles/s41586-023 (I helped a little w/ neural analyses)

When the mouse faints, its eyes roll back and most neurons across the brain *shut off completely* (at yellow line in first figure, shows one example #neuropixels recording). But neurons in the hypothalamic PVZ increased their firing during this time period (first group in the second figure). These neurons were causally implicated: inhibition increased fainting duration while excitation increased arousal.

#neuroscience #syncope #fainting #vagal #discovery

Hi everyone!

The BrainGlobe Initiative exists to facilitate the development of interoperable Python-based tools for computational neuroanatomy, particularly in model organisms.

For more details please see brainglobe.info or chat with us at brainglobe.zulipchat.com.

#neuroscience

@jonny In auto-pi-lot do you ever run into a situation where a zmq request is not replied to? and things get stuck? I took a look in `node.py` and couldn't tell if you do some time of timeout and message handling.

I'm asking because I'm thinking of re-writing part of our infrastructure to use REQ/REP zmq calls (which are now local function calls. this would be the first step in moving away from Matlab)..

Deadline is Nov 20!!

Sainsbury Wellcome Centre  
Looking to launch your career in neuroscience? Apply to join our 2024 PhD programme at SWC: 🧠 World-class training in systems neuroscience 💰 Fully-...

Surprisingly, the block prior was represented by few neurons in very few regions. To investigate this further, we devoted a whole companion paper to it, where additional analyses discovered widespread representations of the prior. (7/8)
biorxiv.org/content/10.1101/20

Brain-wide representations of prior information in mouse decision-making

The neural representations of prior information about the state of the world are poorly understood. To investigate this issue, we examined brain-wide Neuropixels recordings and widefield calcium imaging collected by the International Brain Laboratory. Mice were trained to indicate the location of a visual grating stimulus, which appeared on the left or right with prior probability alternating between 0.2 and 0.8 in blocks of variable length. We found that mice estimate this prior probability and thereby improve their decision accuracy. Furthermore, we report that this subjective prior is encoded in at least 20% to 30% of brain regions which, remarkably, span all levels of processing, from early sensory areas (LGd, VISp) to motor regions (MOs, MOp, GRN) and high level cortical regions (ACCd, ORBvl). This widespread representation of the prior is consistent with a neural model of Bayesian inference involving loops between areas, as opposed to a model in which the prior is incorporated only in decision making areas. This study offers the first brain-wide perspective on prior encoding at cellular resolution, underscoring the importance of using large scale recordings on a single standardized task. ### Competing Interest Statement The authors have declared no competing interest.

www.biorxiv.org
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We are excited to present a Brain-Wide Map of neural activity during a complex decision-making behavior, a product of the monumental effort of 22 labs: 547 Neuropixels recordings in 267 brain regions from 115 mice collected in 11 labs 🐭 (1/8)
biorxiv.org/content/10.1101/20
#neuroscience

A Brain-Wide Map of Neural Activity during Complex Behaviour

A key challenge in neuroscience is understanding how neurons in hundreds of interconnected brain regions integrate sensory inputs with prior expectations to initiate movements. It has proven difficult to meet this challenge when different laboratories apply different analyses to different recordings in different regions during different behaviours. Here, we report a comprehensive set of recordings from 115 mice in 11 labs performing a decision-making task with sensory, motor, and cognitive components, obtained with 547 Neuropixels probe insertions covering 267 brain areas in the left forebrain and midbrain and the right hindbrain and cerebellum. We provide an initial appraisal of this brain-wide map, assessing how neural activity en- codes key task variables. Representations of visual stimuli appeared transiently in classical visual areas after stimulus onset and then spread to ramp-like activity in a collection of mid- and hindbrain regions that also encoded choices. Neural responses correlated with motor action almost everywhere in the brain. Responses to reward delivery and consumption versus reward omission were also widespread. Representations of objective prior expectations were weaker, found in sparse sets of neurons from restricted regions. This publicly available dataset represents an unprecedented resource for understanding how computations distributed across and within brain areas drive behaviour. ### Competing Interest Statement The authors have declared no competing interest.

www.biorxiv.org

🚨We have an open position for a research assistant in systems #neuroscience! Please, check the attachment for details. Reposts are welcome 🙂

Is food addiction real? Apparently if it is "ultra-processed"

theguardian.com/food/2023/oct/

> As Van Tulleken explains, “Addictive products are not addictive for everyone. Almost 90% of people can try alcohol and not develop a problematic relationship; many can try cigarettes, or even cocaine.” Equally, not everyone who eats UPFs will become addicted – but, based on current studies, one in seven will. “Many UPFs for many people are addictive,” Van Tulleken summarises. “And when people experience food addiction, it is almost always to UPF products.”

Excited to share our _open access_ paper in Nature Neuroscience investigating the role of the rat frontal and parietal cortices in economic decisions under risk.

nature.com/articles/s41593-023

We found that silencing the frontal orienting field (FOF) in rat secondary motor cortex increased risk-aversion and we could decode the value of the lottery on each trial from the population activity of the FOF.

@Nature

p.s. We are looking to hire a postdoc to work in mice models of economic (esp. strategic) decisions. Message me if you will be at SFN and would be interested in working at the amazing @SWC_Neuro

I was wondering what right now must feel like for the Israelis that have been fighting the Netanyahu government and/or pushing for an end to hostilities with the Palestinians. The visceral pain of the brutal terrorism Israel experienced has to conflict with the awareness of the inevitably brutal response that is happening/coming. That tension must be unbearable.

jewishcurrents.org/we-cannot-c

Looking to launch your career in neuroscience? Apply to join our 2024 PhD programme at SWC:

🧠 World-class training in systems neuroscience
💰 Fully-funded 4-year programme
💂 Based in London with close links to the Gatsby Computational Neuroscience Unit

Learn more and apply by 20 Nov: sainsburywellcome.org/web/cont

#PhD #Neuroscience #Career #Training #London

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