Rob Beagrie @rbeagrie@qoto.org
Group leader and Wellcome Sir Henry Dale Fellow based at the Wellcome Centre for Human Genetics at Oxford University. Interested in genomics, single-cell technologies, 3D DNA folding and chromatin disruption in human disease. He/him.
Tha mi ag ionnsachadh Gàidhlig.
Joined Nov 2022
@bensb @pjacock @AMathelier ooh this is a great tip. Especially if there’s a way to convince FileZilla (or equivalent) to use the already established master connection…
@pjacock @AMathelier we have 2FA for every single SSH login as well. Does make everything much more painful! I’ve gotten used to doing everything in a screen session so I don’t have to log in again.
Rob Beagrie
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Whispering: rich students have been paying other people to do their homework for decades, have you considered that maybe the real threat of OpenAI text to academia is that now the underprivileged have a way to fake their way through your social stratification system.
Rob Beagrie
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RT @mikhailspivakov@twitter.com
A clear and comprehensive overview of the state of the art in the enhancer field.
https://www.nature.com/articles/s41594-022-00896-3
🐦🔗: https://twitter.com/mikhailspivakov/status/1601301483726991360
Rob Beagrie
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#Christmas is almost here, and the presents are near so I asked #Santa for a #research #grant 😬
Rob Beagrie
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Question for people working with gene expression data from multiple populations: is there a way to control for neutral structure when looking for differentially expressed genes? E.g. determine expression differences among populations above that expected by genetic drift? Please boost!
Rob Beagrie
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RT @johanna_gassler
How is the embryonic chromatin activated?
https://science.org/doi/10.1126/science.abn7478
I am happy to share our findings on how Nr5a2 acts as a pioneer factor during the murine zygotic genome activation @ScienceMagazine #ScienceResearch
Together with @WataKobayashi, @SiwatChad
& Imre Gáspár.
Really interesting read from @ardemp@twitter.com - Piezo2 helps neurons sense passage of food through the gut https://www.biorxiv.org/content/10.1101/2022.11.27.518109v1 #genetics #neurons #preprints
Rob Beagrie
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RT @Hannah_K_Long@twitter.com
An elegant use of dual reporter assays and scRNA-seq to carefully unpick exquisite cell-type specific activities of retinal enhancers for PAX6. Congratulations to all involved! https://twitter.com/wendy_bickmore/status/1597507691089653760
🐦🔗: https://twitter.com/Hannah_K_Long/status/1597628472364437504
Rob Beagrie
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Our team is hiring ! We are looking for three postdoctoral researchers in the field of atomic force microscopy #AFM, single molecule fluorescence spectroscopy (#smFRET) and #DNAorigami.
More info & application process here.
https://integrativebiophysicsofmembranes.wordpress.com/2022/11/28/now-hiring/
Please spread the info !
@gahousman congratulations on the new position!
Rob Beagrie
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Rob Beagrie
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RT @angifeldmann@twitter.com
Apply now. Our lab is hiring to work on exciting projects at the interface of gene regulation, 3D genomics and carcinogenesis. https://twitter.com/michael_boutros/status/1595476612446838784
🐦🔗: https://twitter.com/angifeldmann/status/1596756908546801669
Rob Beagrie
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A #fellowship in #datascience #bioinformatics at University of Alberta. Interested in applying your skills to #diabetes #research integrating data from humans to #singlecell ? Give me a shout.
Rob Beagrie
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RT @wendy_bickmore@twitter.com
When I get asked … but are your findings applicable genome-wide?..I always respond by illustrating the general principles Doug has revealed by studying one locus- alpha globin. An inspiration. https://twitter.com/gensocuk/status/1593657790551117827
🐦🔗: https://twitter.com/wendy_bickmore/status/1593876905207517185
Rob Beagrie
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RT @lauragrayblair@twitter.com
@TheodoreLytras@twitter.com @DrBradBrad@twitter.com It’s been policy since the last round of strikes. Here is QMUL’s FAQs. During the marking boycott I lost my entire July paycheck, deducting more than I ever would have been paid for the marking - effectively meaning I wasn’t fully paid for work I did during the previous term.
🐦🔗: https://twitter.com/lauragrayblair/status/1595883238903656448
@lauraczd What we’re planning to do would probably be more fairly described as semi-correlative. We’ve got a population of cells where around 50% have a distinctive chromatin rearrangement in the nucleus that can only be identified by EM. We want to see if that phenotype is associated with a different distribution of various nuclear proteins. So the EM part is mostly just to identify cells of interest.
Rob Beagrie
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RT @YusukeKishi1@twitter.com
Our collaborative work was just published! Congrats Koizumi-san! Utx, a histone demethylase, regulates proper brain development and its knockout induces ventriculomegaly, and postnatal death.
https://faseb.onlinelibrary.wiley.com/doi/10.1096/fj.202201002RR
🐦🔗: https://twitter.com/YusukeKishi1/status/1595298111098093568
@flatley176 Julia maybe?
@lauraczd Hi Laura! Can I ask what type of CLEM you’re doing? We’re thinking about some CLEM experiments using Tokuyasu sections at the moment so interested to hear from anyone else in Oxford using the technique!
Group leader and Wellcome Sir Henry Dale Fellow based at the Wellcome Centre for Human Genetics at Oxford University. Interested in genomics, single-cell technologies, 3D DNA folding and chromatin disruption in human disease. He/him.
Tha mi ag ionnsachadh Gàidhlig.
Joined Nov 2022
