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RT @flekschas
👋 friends, I'm excited to share an interactive scatter plot widget for (@ProjectJupyter) I worked on for some time:

jupyter-scatter github.com/flekschas/jupyter-s

It can draw millions of points, line connections, link multiple scatters & animate transitions (1/4)

Medycy z akcji pomogli już prawie 2000 uchodźców!
Jeżeli jesteś lekarzem/lekarką i chcesz dołączyć do inicjatywy, zarejestruj się tutaj: lekarzedlaukrainy.pl/pl/regist

The original comparison of Adam vs AdamW is quite memorable.

On a related note, I absolutely recommend reading through reviews of that publication
openreview.net/forum?id=rk6qdG

If you happen to be at @ISMBinfo conference, feel invited to drop by our poster "Clusters of interactions between operational taxonomical units in human gut " about using and for function mining in taxons!
Done with @valentyn_bez, @pawel_labaj, and more

RT @pawel_labaj
Last hours to submit! camda.info @CAMDA_conf @iscb @MCB_UJ @US_FDA @maqcsociety @metasub @NIH @JagiellonskiUni @mason_lab @xdopazo @dpkreil twitter.com/pawel_labaj/status

's little sibling, , while not potent as the full version is still capable of producing some interesting images.
Prompt: "happy microbe, digital art"

is an obvious tool in IT, but don't let your information bubble fool you - it's a very underused tool in .
Publishing your code on github is great for , but with docker you can go one step further and make it futureproof

RT @CAMDA_conf
Abstracts due today 20 May AoE! Present your best work at @ISMBinfo: Take the Camda Challenge – @US_FDA Literature AI, Anti-microbial Resistance, Disease Maps – or share late breaking method papers👉camda.info @IARAInews @ELIXIREurope @metasub @iscb @NIH

RT @j_foerst
I drafted a quick "How to" guide for writing ML papers. I hope this will be useful (if a little late!) for . Happy paper writing and best of luck!!
docs.google.com/document/d/16R

Spotify seems to be dead set on making me a fan of the Doors, but you won't see me complaining
open.spotify.com/track/0JNZGIa

Try out your best approaches, and see you at the leaderboards!
BTW, just a reminder: @AI21Labs's models are legal in the challenge


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RT @CAMDA_conf
Final call for abstracts. Present your best work at @ISMBinfo: Take the Camda Challenge – Literature AI, Anti-microbial Resistance, Disease Maps – or share late breaking method papers! Extended abstracts 20 May. 👉camda.info @IARAInews @e
twitter.com/CAMDA_conf/status/

RT @RafalMostowy
Please RT // Exciting opportunity to apply evolutionary genomics & AlphaFold2 to study co-evolution between bacterial sugars and phage proteins. Join our lab as a postdoc! Deadline: 30.06.
mostowylab.com/postdoc-sonata-

The deadline has been extended to 20th May.
Help @US_FDA in doing what comes after - keeping track of the drug safety.

Design an algorithm that will relieve humans of this task, submit it to CAMDA, and let's see each other on @iscb's ISMB!

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RT @CAMDA_conf
Validation Leaderboards now live! Disrupt by Literature for : Build a digital twin of @US_FDA experts and identify r…
twitter.com/CAMDA_conf/status/

Together with our friends from and David Kreil’s and Sepp Hochreiter's IARAI we've been working on an -oriented that is focused on tracking safety of the drug after clinical trials.
Consider a doctor that wants to help their patient through pharmacological treatment. Even if it doesn't cause any immediate adverse reaction, it still involves a major, long-term risk - , drug-induced liver injury.
Even though the of the drugs is modelled and tested thoroughly during clinical trials, this method isn't 100% accurate and the danger related to them might be observed only later.
Right now, there is only one way of guarding against it in a real world scenario - constantly reading through publications regarding the drugs that you want to prescribe. Of course, there are many information banks which contain and aggregate this information, but they are still human-curated - which means that this problem isn't solved, it's just dumped on somebody else.
We want the participants to prove once and for all that humans can be relieved if this task.
The final, validation round has just began! You still have time until 16.05 to submit your results to ISMB 2022.

bipress.boku.ac.at/camda2022/
If you know anyone who might be interested, it'd be fantastic if you could spread the word.

Together with FDA and @HochreiterSepp's IARAI we've been working on an -oriented challenge that is focused on tracking safety of the drug after clinical trials.
Submit before 16th may to join us at @CAMDA_conf 2022 in Wisconsin!
bipress.boku.ac.at/camda2022/

The second - that the model's github implementation _actually_ works out of the box! It should be a standard, but for some reason it rarely works for me

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The first one is the dual - comparing all models both default and tuned .
Sure, it doesn't make much difference for production deployment of the model, but good defaults are very convenient during and early experiments

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Popov et al.'s NODE might not be the newest , but I love two things about it. 🧵

arxiv.org/abs/1909.06312

is cool, but if you're fine with a considerably cheaper bootleg version, then AI21's Jumbo is for you

studio.ai21.com/playground

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