Speaking of #celegans ... now the wireless #connectome!
"The neuropeptidergic connectome of C. elegans" by Lidia Ripoll et al. 2022, a collaboration between Isabel Beets', Petra Vertes' and Bill Schafer's labs https://www.biorxiv.org/content/10.1101/2022.10.30.514396v2
"This connectome is characterized by a high connection density, extended signaling cascades, autocrine foci, and a decentralized topology, with a large, highly interconnected core containing three constituent communities sharing similar patterns of input connectivity. Intriguingly, several of the most important nodes in this connectome are little-studied neurons that are specialized for peptidergic neuromodulation."
Hi #ScienceMastodon #neuroscience #drosophila #insects ! just migrated and looking for people to follow...
@psychxr @FroehlichMarcel @PessoaBrain @SussilloDavid @albertcardona
@teixi
@manlius
Thank you Konrad. Now that we know where the buttons are and we'll all boosted the intros, let's science.
Here's one we have not yet resolved. Let's say I want to use the word 'Emergent' in the title of my next paper. What better be true abut my system? (eg Is it whole is bigger than sum? How would I show?)
Did Hopfield get it right?
https://www.pnas.org/doi/pdf/10.1073/pnas.79.8.2554
https://mastodon.social/@kordinglab@sigmoid.social/109314640406987605
I'm Sibylle, assistant Prof in the data mining group at TU Eindhoven. I have a thing for matrix factorization and the theory it provides in the context of clustering and the general interpretation of latent spaces. I try to use this knowledge to improve the theory of ML, currently with a focus of DL and uncertainty in AI.
I'll toot for promotion of good work and the occasional rant, as it befits my German resolute nature.
@albertcardona @dahaniel @flypapers Yes, the tag is there when "Melanogaster" is in title or abstract. And yes, if the abstract says "In contrast with Drosophila melanogaster, polar bears have no wings" then it'll be tagged. Hopefully that won't be so often.
Hello #ScienceMastodon!
I'm a microscopist and image analyst at the BIOP imaging center at EPFL in Switzerland.
I'll be sharing mostly nerd stuff about #ImageJ/#FijiSc. Can't wait to see if the scientific mastodon community takes off!
So, let's get serious: can we share videos here? Let's find out:
With three simple steps and in just 48 hr, EZ Clear effectively renders adult mouse organs optically transparent while preserving signals from fluorescent reporters. https://elifesciences.org/articles/77419
An #introduction to eLife's new Mastodon page!
We're an #OpenAccess not-for-profit journal that publishes and reviews #research in the life and biomedical sciences.
We want to improve the way research is practised and shared in part by working with early-career researchers #ECR and supporting #OpenSource technology.
We also just announced our new publishing model that we hope will tackle an overreliance on journal titles and publishing decisions as quality measures for science and scientists.
We're hiring a project manager with comp neuro/ #neuroscience / data or computer science background, and #scicomm skills! Apply latest Nov 30: https://ki.varbi.com/en/what:job/jobID:559908/ #openscience #datasharing
Genome of the bee louse fly! “Whatever” you might say, but this weird fly is actually the closest relative of drosophilid flies, and as such super interesting for comparative reasons. Wiki photo shows one sitting on the head of a honey bee. https://www.biorxiv.org/content/10.1101/2022.11.08.515706v1
#introduction post! My name is Sonia Roberts (she/her) and I'm a postdoc at Northeastern developing #knit sensors for #soft, fully knitted #robots. My PhD work was on #legged robots running around in the desert (ever gone for a beach run?). I use my robots to test ideas about #affordances and #DirectPerception. I have also done some #SciencePolicy and #TechnologyPolicy #policy work around algorithmic transparency and regulating the use of mobile sentries by law enforcement.
As a #colourblind person, I appreciate people checking their figures in greyscale. But it's a lot of work to always convert your figures into greyscale, right? A lesson from digital artists: you don't have to!
There are easier ways for all operating systems! (see replies)
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Checking your figures in greyscale may not resolve all visual impairment issues, but it really helps! Plus, it allows YOU to appreciate *contrast*. Use contrast to your advantage!
Come be our colleague! Six open positions in the Department of Life Sciences at Imperial College London. Cell and Dev Biol, Infection and Immunity, Molecular Mechanisms of Disease, Plant Sciences, Biotech and Bioengineering, Chair in Microbiology. Great department, great students, great colleagues.
https://t.co/TmLndtliLD
https://t.co/nEjKYn7c4E
https://t.co/JKghC2VScD
https://t.co/IWexgIf6t3
https://t.co/lfP4dCwhih
https://www.imperial.ac.uk/jobs/description/NAT01313/chair-microbiology/
#academicjobs
Here is my #introduction. I am a biologist interested in #neuroscience and the #evolution of cells and nervous systems. My research group studies #ciliated marine larvae from a whole-organism perspective, combining behaviour, #connectomics, #imaging, #CRISPR, #modelling and other approaches. We love marine #larvae, their #neurons, #cilia, and #neuropeptides.
Now @Raspberry_Pi has its own @Mastodon instance, and because we’re committed to supporting platforms that support us, we’re putting our money where our mouth is. We have become a platinum sponsor of #Mastodon. In case you don't know Mastodon is a non-profit corporation based in Germany supported by both its sponsors and patreons. #TwitterMigration https://joinmastodon.org/sponsors
Amusing sequence in my screen now, and perhaps an sensible answer to your observation.
https://qoto.org/web/statuses/109314300884900628
Tony Zador: "We used BARseq in situ sequencing to identify genes in ***1.2 million neurons*** throughout the mouse brain. We found that cortical areas with similar cell types are also interconnected. We call this “wire-by-similarity.” "
https://biorxiv.org/content/10.1101/2022.11.06.515380v1
HT @PessoaBrain
Did you know that you can copy-paste images into the text field, and they get added to your toot as if you had appended them? Very handy to avoid creating intermediate files, by right-click on a PDF, copy image, and paste here; or right-click on an image on a website, and paste here.
Did you know that you can follow hashtags? A convenient way to follow entire domains of knowledge without having to find its members first.
Did you know that the website works perfectly from a mobile web browser? No need for an app; the latter are often better looking, but lack some of the functionality.
Did you know that starring a toot doesn't promote it? It's only like an "I see you" and a bookmark of sorts. (The is also a bookmark button, which is just that, without telling the sender.) If you want to promote a message, boost it.
How does the brain work? Someday, we'll figure it out.
Group Leader, MRC LMB, and Professor, University of Cambridge, UK.
#neuroscience #Drosophila #TrakEM2 #FijiSc #CATMAID #connectomics #vEM
Born at 335 ppm.
Brains, signal processing, software and entomology: there will be bugs.