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Two papers from Semantic Web Applications and Tools for Health Care and Life Sciences 2023 #SWAT4HCLS2023 @swat4hcls with Bgee inside:
• Towards predicting essential proteins via federated SPARQL queries ceur-ws.org/Vol-3415/paper-45.
• Data in use for Alzheimer disease study: combining gene expression, orthology, bioresource and disease datasets ceur-ws.org/Vol-3415/paper-47.
#SIB #SemanticWeb #bioinformatics #GeneExpression

Comparing Kenyon cells between sawflies (ancestral Hymenoptera) and honeybees:

"Evolutionary dynamics of mushroom body Kenyon cell types in hymenopteran brains from multi-functional type to functionally specialized types", Kuwabara et al. 2023 science.org/doi/10.1126/sciadv

"the functions in learning and memory of the ancestral KC type were heterogeneously inherited among the KC types in the honey bee."

#neuroscience #Hymenoptera #honeybees #bees #KenyonCells

Hey Mastodon users! This is my first post as I just opened my account migrating from @doctorpoe on twitter. I hope to find my old friends and make new ones among the mastodon conoscenti.

You don't have to use Mastodon through an app!

Every server has its own website where you can log in and use all its features. The web interface is excellent, and it usually gets the latest features before the apps do.

Your server's website address will usually be the same as its name, for example the website for the server kind.social is at kind.social

The website works on both computers and phones. (If you're using the phone version, click # to see the search box.)

#FediTips

Looking forward to a great day of talks at the Jacques Monod insect models for infection biology! Thanks to @eLife and all sponsors! #InsInf2023

The trial is for idiopathic pulmonary fibrosis.

'The company said the drug, INS018_055, was the first entirely “AI-discovered and AI designed” drug to begin a phase 2 clinical trial and represented an important milestone for the industry.'

ft.com/content/82071cf2-f0da-4

Yet another study showing that tumor mutation burden is a poor predictor of response to checkpoint blockade.

"First we assembled the largest pan-cancer dataset of immunotherapy patients with sequencing and clinical data. Surprisingly, we find little evidence that TMB is predictive of response to ICB.
(...)
Our analysis shows that the use of TMB in clinical practice is not supported by available data and can deprive patients of treatment to which they are likely to respond."

elifesciences.org/reviewed-pre

“It’s stunning,” says the immunologist Barney Graham, the former deputy director of the Vaccine Research Center and a central figure in the development of mRNA vaccines, who has lately been writing about a “new era for vaccinology.” “You cannot imagine what you’re going to see over the next 30 years. The pace of advancement is in an exponential phase right now.”

nytimes.com/2023/06/23/magazin

Postdoctoral Researcher – Ellerby lab

Buck Institute for Research on Aging

#Ellerby lab at #Buck seeks a #Postdoc Scientist experienced in stem cells, neurodegenerative diseases & mouse models.

See the full job description on jobRxiv: jobrxiv.org/job/buck-institute

#ScienceJobs #hiring ...
jobrxiv.org/job/buck-institute

“Equity in science is not a political issue; it’s good science.” The authors caution that in order to move equity to the center of scientific research, “we must first recognize and acknowledge whom our scientific and institutional processes harm and how,” noting that acknowledging this harm “is the first step” towards positive change.'

forbes.com/sites/marybethgasma

#OTD 26 June 1925 Jean Frydman was born. A French Jew, he became active in the Resistance & even escaped a deportation train to Buchenwald. He was a peace advocate who helped negotiated the Oslo Peace Accords 1993 between Israel & Palestine. He died in 2021 at the age of 95.

'Intas provided America with a lot of frontline chemotherapy drugs—half of the country’s supply in some cases—that are used to treat more than a dozen types of cancer. When the disastrous inspection led the company to halt production, other manufacturers couldn’t make up the difference.'

theatlantic.com/health/archive

Referenced link: nature.com/articles/s42255-023
Discuss on discu.eu/q/https://www.nature.

Originally posted by Nature Portfolio / @NaturePortfolio: nitter.platypush.tech/NaturePo

Pairing exercise with a diet-induced weight-loss intervention leads to greater improvement in insulin sensitivity and glucose control than dieting alone in people with obesity and prediabetes, according to a clinical trial published in @NatMetabolism. nature.com/articles/s42255-023

Last year, we failed to replicate some key experimental results in an extraordinary @eLife paper. Our results, the authors' response, and a correction to the original paper are now published.

elifesciences.org/articles/844
elifesciences.org/articles/853
elifesciences.org/articles/900

My opinion is that the original paper is flawed and should be retracted, but now @eLife readers can hear from both sides and decide for themselves.

'Provision of Signal 2 from DCs to naïve T cells during priming is the second critical step [30], which usually takes the form of DC-expressed CD80 and CD86 interacting with CD28 on T cells. Consistent with this, Cd80−/−Cd86−/− mice have impaired CD8+ T cell responses after Ad5 immunization, but for reasons that remain to be elucidated Cd28−/− mice have a different phenotype: delayed but not fully impaired CD8+ T cell responses'

onlinelibrary.wiley.com/doi/10

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