Edwin Hernandez-Garzon @elfulbito@qoto.org

RT @AlainChedotal
Wild Disco! @erturklab. Removing cholesterol with Cyclodextrin improves antibody penetration for 3D immunolabelling of whole mouse body. Combined with 3DISCO clearing. Nice collection of movies describing lymphatics & nerves generated with @syGlassVR
https://biorxiv.org/cgi/content/short/2023.02.17.528921v1

RT @AI4LifeTeam
📣 We're thrilled to launch the first #AI4Life #OpenCall today! We offer #DeepLearning support to life #scientists who have unmet image analysis needs.

Apply now!
https://ai4life.eurobioimaging.eu/first-open-call/

⏳Deadline: March 31, 2023

@REA_research #AI #Bioimaging #Imaging #ImageAnalysis

RT @biovoxxel
Amazing initiative meant to facilitate and improve scientific image publishing quality.
Have a look at https://arxiv.org/abs/2302.07005

#bioimaging #Publication #Images #ScienceCommunication

RT @MartinFernholz
I am super excited to show you DeepD3, an open framework for automated quantification of dendritic spines. Finally an open-source tool to quickly and reliably identify and segment dendritic spines in a wide range of image data! Tweeprint below. (1/21)

RT @chiarellast
Happy to present @PhotonicsWest: "FLUTE: a Python GUI for interactive phasor analysis of FLIM data".
Open source code developed by #DaleGottlieb with @baharasadipour and #LienUng @LabOptBio.
Free user-friendly GUI for large FLIM dataset.
https://github.com/LaboratoryOpticsBiosciences/FLUTE

RT @erturklab
An unbiased study of whole biological systems is key to deciphering complexity. Our new paper describes the steps & applications of vDISCO whole mouse imaging in @NatureProtocols work by @MarikaRuiyao, @ilginkolabas et al. #vDISCO #clearing
https://www.nature.com/articles/s41596-022-00788-2 🧵👇1/n

RT @jmutterer
Take a break from Python and try the new ImageJ Turtle Graphics macro library. Adapted from the Apple II logo version, straight from the 80s 🤣!

RT @haesleinhuepf
Exciting news! 📢 @NEUBIAS_COST receives funding from @cziscience for founding a sustainable Society for Knowledge Exchange in #BioImageAnalysis 🎉
Big thanks to CZI, everyone involved in ✍️ and our new hosting organization @GerBI_GMB 😃
🔬🖥️🥳
Read more: https://gerbi-gmb.de/2023/01/24/neubias_czi_funding/ https://twitter.com/cziscience/status/1617933094685933569

RT @redglial
Hoy es un día muy triste para nuestra red, hoy perdemos a nuestra compañera Elena Galea. Nos qureemos despedir con las palabras de @AmandaSSaavedra. “Lo primero que llamaba la atención de Elena era majestuosa melena blanca.

RT @turkubioimaging
We are very happy to announce our Image analysis course is opening to register! Apply here: https://link.webropolsurveys.com/S/2E24DD62253BA8A0🧑‍💻

RT @Springer_Shop
#OpenAccess #NEUBIAS textbook: #Bioimage Data Analysis Workflows ‒ Advanced Components and Methods (2022) https://bit.ly/3XYTpHJ Edited by Kota Miura @cmci_ and Nataša Sladojene. #AuthorThursday #SNAuthors #BiologicalImaging

RT @haesleinhuepf
Did you know? After setting up an image processing workflow using the napari-assistant, you can export a @ProjectJupyter Notebook with Python code to reproduce and refine it 🔬🖥️🤓
Install devbio-napari to give it a try 🚀 Feedback 💚ly welcome!
https://github.com/haesleinhuepf/devbio-napari

RT @joshim5
📢 Our new #manuscript shows how zero-shot Generative AI can create de novo antibodies from scratch.

🏅Hundreds of antibodies are created zero-shot and validated in the wet-lab for the first time ever.

Paper: https://www.biorxiv.org/content/10.1101/2023.01.08.523187v1
Data: https://github.com/AbSciBio/unlocking-de-novo-antibody-design

RT @EMBLEvents
Do you want to apply deep learning-based methods to your own data and #microscopy image analysis problems? Join us at #EMBLDeepLearning, our coding-heavy course where you can learn just that!

📅 5 – 9 June 2023
📩 Apply by 13 March
📍 EMBL Heidelberg
🔗 http://s.embl.org/mac23-01

RT @Mezarque
A tad late for #InverteFest, but I submitted a set of my arthropod Lego designs to @LEGOIdeas!

My set idea "Arthropod Model Organisms" features models for a fruit fly, amphipod crustacean, red flour beetle, and two-spotted cricket.

Vote here:
https://ideas.lego.com/s/p:c629ad4459f8452abfba2b6b96e29f54

1/n

RT @preibischs
Exciting New Year's release of #BigStitcher! It now supports:
1) efficient blocked processing, meaning large, tiled acquisitions are fused blazingly fast (second/minutes instead of hours)!
2) Export of ZARR/N5/HDF5 thanks to the N5-API
Check it out, just update @FijiSc!

RT @erturklab
Spatial-omics goes 3D🤗! Out at Cell @CellCellPress 👉🏼 We developed DISCO-MS with @labs_mann, a spatial proteomics technology for specimens fully imaged in 3D. DISCO-MS is aided by robotics and enables the study of diseases at their early stages. https://www.cell.com/cell/fulltext/S0092-8674(22)01465-9🧵👇

RT @CSIC
La presidenta del CSIC, @delPinoE, ha recorrido hoy el nuevo Centro de Investigaciones Interdisciplinares de Alcalá (CI2A), que acoge:
▪️ @CINCnews
▪️ @InstitutoCajal
▪️ @IQOG_CSIC
▪️ @IQM_CSIC
➡️ https://bit.ly/3FOE2tI