Not only did we have a great meeting - but we also got a cool catch of protists in the ponds around!
Thx @Dey_Gautam & @EelcoTromer & @Co_Biologists
The movies are below in the comments!
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RT @Co_Biologists
Thank you to organisers Gautam Dey @Dey_Gautam
& Eelco C. Tromer @EelcoTromer and all attendees for a great Workshop on Genotype to Phenotype: Bridging Comparative Genomics and Cell Biology.
https://biologists.com/workshops
…
https://twitter.com/Co_Biologists/status/1593179044027461636
🚨Please RT: There is an open 3-year postdoc position open for a bioinformatician in my lab at Sars Centre in Bergen.
Project on gene expression & chromatin accessibility changes in quiescent cells. Deadline: 25th November.
More info & apply at: https://tinyurl.com/yc43x7mc
Beautiful work by Omaya Dudin @DudinLab reminding us of the massive undersampling of diversity in modern functional #biology.
The first look at the #development of just one Ichthyosporeans (close relatives of animals) opens up completely new worlds that we could not have predicted from genomes only.
Check out this life-cycle video:
https://bit.ly/3twr8uJ
from https://elifesciences.org/articles/49801
and there is a lot more diversity of life cycles and cleavage patterns across the group
#BiologistsWorkshops
"The controlled expression of one cellular feature -- the cilium -- was likely critical during early animal evolution. Two key transcription factors, RFX and FoxJ1, coordinate ciliogenesis in animals but are absent from the genomes of most other ciliated eukaryotes, raising the question of how the transcriptional regulation of ciliogenesis has evolved."
Flora Vincent shows cool mesocosm experiments conducted in Norway to characterise the rise and demise of an algal boom - a month-long time series
https://www.biorxiv.org/content/10.1101/2021.10.25.465659v1
#BiologistsWorkshops
@vincentflora
#Introduction to #ScienceMastodon
I am a #Cilia #Islet #Biologist and endocrinologist at WashU in St Louis.
#PrimaryCilia because it is the center of the cell and my world.
Unafraid to challenge convention and do difficult experiments (because we don’t know better).
Also #Microscopy because seeing is believing.
#Cilia #cell #center #cytoskeleton #betacell #signaling #diabetes
Image credit #WUCCI and Alex Polino
For neuroscientists attending #sfn22: don’t miss the poster by Mitya Chklovskii’s group describing the completion status of the whole brain #connectome of the fairy wasp #Megaphragma, of expected completion early in 2022. Find the poster tomorrow Monday morning, number 328.16 / YY35.
Mitya kindly shared the poster image publicly elsewhere.
This tiny #wasp is famous for being the size of a large paramecium (a unicellular organism) and for enucleating the vast majority of its central neurons while pupating. The adult has less that 10,000 neurons in its central brain yet it isn’t missing any organ or body part. See the paper that jumpstarted this effort:
Polilov AA. The smallest insects evolve anucleate neurons. Arthropod structure & development. 2012 Jan 1;41(1):29-34. https://www.sciencedirect.com/science/article/pii/S1467803911000946
I'm very fortunate to be a co-organiser of "Dynamic Cell V", the latest in the Biochemical Society and BSCB meeting series showcasing the activity of living cells from all kingdoms of life. The details are: 17 to the 20 April 2023, Loughborough University (UK). Registration will open at https://biochemistry.org/events/dynamic-cell-v/
Job ad: Group Leader position in computational neurobiology https://cbd.sites.vib.be/en/join-us#/job-description/51111
Place: VIB-KU Leuven Center for Brain & Disease Research, Belgium.
Notice there are many other advertised job positions at that same research center, including lab tech, postdocs, #electronmicroscopy experts (#vEM), #proteomics specialists, administrative, and more: https://cbd.sites.vib.be/en/join-us#/job-list
About a year ago I started using #RMarkdown and #Xaringan to prepare presentation and I love it. Efficient, elegant, saves disk space and allows you you to easily prepare slides with a very consistent layout and style.
For an example see:
https://jekelylab.github.io/Presentation_template.html
You can use this repo https://github.com/JekelyLab/jekelylab.github.io to get started.
# Introduction
From the Roscoff Biological Station (#CNRS and #Sorbonne University) as well as visiting prof at NTU Singapore. Developing reference databases for #eukaryote #metabarcoding (18S rRNA).
#microbiology #ecology #RStats
https://pr2-database.org/
Since it proves challenging to find everybody at #mastodon, I thought it would be useful to add a little #introduction to my profile!
I am a neuroscientist, heading the research group Olfactory Coding at the MPI in Jena and interested in olfactory circuits, sensory processing and plasticity in #Drosophila. Key techniques are 2P functional imaging, SSR, anatomical tracing, neuronal reconstructions, neuro-/ optogenetics and diverse behavioral assays to study innate/ learned olfactory behavior.
Have a look at the workshops program, journals and grants of the awesome 'The Company of Biologists', the not-for-profit UK charity run by practicing scientists
https://www.biologists.com/workshops/
@Co_Biologists
Such a cool example of eukaryotic #excitability:
Rapid calcium influx triggered by the presence of mucus induces encystation of the ciliated zoospore of a frog-killing #chytrid fungus
Cilium mediated??
https://www.sciencedirect.com/science/article/pii/S0960982222005759
#BiologistsWorkshops
Lillian Fritz-Laylin @FritzLaylin
Lillian Fritz-Laylin studies the life cycle and movement of chytrids and Naegleria to understand the evolution of the actin cytoskeleton
https://www.fritzlaylinlab.org/
https://www.sciencedirect.com/science/article/pii/S0960982221000014
Cool movies on crawling ciliated chytrid zoospores:
https://static-movie-usa.glencoesoftware.com/mp4/10.1083/342/e1957dfe997fcd55db7a23a4fd24c5a0b9a72443/JCB_201701074_V4.mp4
#BiologistsWorkshops
Check out the EukProt v3 BLAST database with The Comparative Set (TCS) (with 196 species chosen based on BUSCO completion and phylogenetic importance)
Jeremy Wideman
https://evocellbio.com/eukprot/
#BiologistsWorkshops
Arrived at Buxted Park for "Genotype to Phenotype: Bridging Comparative Genomics and Cell Biology" workshop
organised by Gautam Dey & Eelco Tromer
run by the Company of Biologists
#BiologistsWorkshops #genomics #evolution
https://www.biologists.com/workshops/geno-pheno-2022/
OK, let's try Mastodon :)
and i pin here our last story about incomplete abscission in the germline.
https://www.science.org/doi/10.1126/science.abg2653
Hi Mastodon community! I am a MRC Investigator and group leader at the MRC Human Genetics Unit at the University of Edinburgh. Very glad to be here...
A certified '#cellbiology on an organismal scale' fanatic- we believe seeing is believing! We ❤️ hacking ways to 'see' biology happen in real time across scales in health and disease!
Imaging addict. Genome wrangler. Developmental biologist at heart.
#cilia #centrioles #genetics #Science #genomesurgery #raredisease
Professor at Centre for Organismal Studies (COS), University of Heidelberg, Germany
and
Living Systems Institute (LSI), University of Exeter, UK.
#neuroscience of marine larvae, #connectomics, #cilia, ciliary swimming, cell and nervous system #evolution, #GPCR, #neuropeptides, #Platynereis, #Trichoplax, #Nematostella, #Schistosoma, #coral #neuroscience #rstat #evolution