Alexander Pico @xanderpico@qoto.org
- https://www.linkedin.com/in/apico/
- UCSF Profile
- https://profiles.ucsf.edu/alex.pico
- Gladstone profile
- https://gladstone.org/people/alex-pico
Superconductor synthesist, structural biologist, molecular neurobiophysicist. Now I develop biomedical #dataviz, #networkscience, and #openscience software tools.
our new NAR paper is out: "WikiPathways 2024: next generation pathway database" https://doi.org/10.1093/nar/gkad960
April 2024 WikiPathways release: 290 edits by 11 contributors and 2 new pathways. Accessible via #webservices and in PathVisio, Cytoscape. Supported by AWSOpen. https://wikipathways.org/#download #bioinformatics #openscience #opensource
**We are moving platforms**
Bioconductor will cease posting on Twitter/X as of December 17, 2023. Instead we will be continuing to post on other social media platforms that better reflect our community’s code of conduct.
Check out our blog post which explains our decision: https://blog.bioconductor.org/posts/2023-11-17-twitter-exit/
Online book about high-dimensional data visualization, by Di Cook and Ursula Laa
Note to my health provider's 24 medical advice line: "Knocking on Heaven's Door" slaps but maybe isn't the best hold music for y'all.
We have posted some reflections and pictures about Michael Ashburner on the Dept Website. https://www.gen.cam.ac.uk/department/history-of-the-department/michael-ashburner
Using Published Pathway Figures in Enrichment Analysis and Machine Learning https://www.biorxiv.org/content/10.1101/2023.07.06.548037v1?med=mas
A new blog-post: the two cultures of bioinformatics, and how academia selects against one https://philippbayer.github.io/blerg/posts/2023_07_02_the_two_cultures/
Do any Mastodon clients sort your home feed by engagement? Or allow customization of the home feed?
Wikipedia is now on Mastodon, at @wikipedia!
They've taken an interesting approach here, as it is an account run by the community, where everyone can contribute (explanation here: https://meta.wikimedia.org/wiki/@Wikipedia). At the same time, it is verified on the official homepage of wikipedia.org, as you can see in the screenshot.
Personally, I think this suits the spirit of the fediverse that the Wikipedia account is not a PR department, but community members building something together!
Recommended Long Now Talk: A great conversation between Annalee Newitz @annaleen and Becky Chambers at The Interval in SF. Resisting Dystopia: https://www.youtube.com/live/XI6qAIJbjs0?feature=share
Change is coming to WikiPathways! Keep an eye out for major enhancements in the coming months. Early next week we will be switching https://wikipathways.org/ to the new site. Preview at https://new.wikipathways.org/ and learn more at our new discussion forum: https://github.com/wikipathways/wikipathways-help/discussions/13
January 2023 WikiPathways release: 151 edits by 13 contributors and 11 new pathways. Accessible via #webservices and in #PathVisio, #Cytoscape. Supported by #AWSOpen. https://wikipathways.org/index.php/Download_Pathways
#bioinformatics #openscience #opensource #nomoa
Single-Cell ATAC-seq analysis via Network Refinement with peaks location information https://www.biorxiv.org/content/10.1101/2022.11.18.517159v1?med=mas
)
10 simple rules for funding scientific #opensource software. #SloanFoundation #PLoSCompBiol https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1010627
November 2022 WikiPathways release: 201 edits by 22 contributors and 8 new pathways. Accessible via #webservices and in #PathVisio, #Cytoscape. Supported by #AWSOpen. https://wikipathways.org/index.php/Download_Pathways
#bioinformatics #openscience #opensource #nomoa
Hi all, WikiPathways is now also on Mastodon: @wikipathways
WikiPathways is an open, public platform dedicated to the collection and curation of biological pathways by and for the scientific community #introduction
@kensanata Please add me to Academia, Biology, Java, Javascript, Machine Learning & Artificial Intelligence, Open Education, Programming, Python, Science, Systems Thinking, Wiki. #Trunk
- https://www.linkedin.com/in/apico/
- UCSF Profile
- https://profiles.ucsf.edu/alex.pico
- Gladstone profile
- https://gladstone.org/people/alex-pico
Superconductor synthesist, structural biologist, molecular neurobiophysicist. Now I develop biomedical #dataviz, #networkscience, and #openscience software tools.
