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Time for an #introduction

I'm a computational (bio)physicisct and have mostly worked with MD simulations of lipid membranes and membrane proteins but also some experience in machine learning and free energy calculations.

Currently I work as a senior scientist at Schrödinger in New York City, after doing a postdoc at Stanford University and a PhD at the Max Planck Institute of Biophysics.

Besides work, I'm an avid amateur photographer and I like reading about science, history, and languages.

I've been here since 2018, but it's time for an #introduction to all new people on the #fediverse!

I'm an Associate Professor at CEU, Austria. I work on #networkscience, in particular with problems related to network data analysis, including community detection and network reconstruction.

My works relies a lot on #Bayesian statistical inference, information theory, and statistical #physics.

I'm the author of the :gt: @graph_tool #python package for efficient network analysis, and the @netzschleuder network repository.

Here's a network data preview card for your viewing pleasure:

networks.skewed.de/net/trec_we

Not too bad .
I tried with hepatocyte polarity
galactica.org/?prompt=wiki+art
The AI nailed the principle of cell polarity and the description is pretty good.
I'm impressed that it got the "hepatic cord".
However, it completely missed the specifics of hepatocyte polarity: Hepatocytes have multiple basal and apical surfaces. Also, the fact that the apical surfaces are facing the gastrointestinal tract is not completely incorrect but a bit misleading.

'Resolving morphogenesis into quantifiable cell behaviours'

by Jeremy Green @jjbaglondon

Very cool poster with the review article in Development journal #Devbiol #Science #morphogenesis

doi.org/10.1242/dev.199794

Hi #devbio #devbiol Mastodon,

If you like sharing and discussing #preprints, you might like to know that Development publishes 'In preprints' articles.

Please do feel welcome to get in touch if you would be interested in writing an article on a preprint - or preprints - that interest you.

Learn more about this article type here: doi.org/10.1242/dev.200711

📢 Please RT
Join our #fly neuroscience lab.

4 year fully funded #phD fellowship to study how animals make decisions during conflicting situations. #neuroscience #drosophila

Deadline 20th Jan
Get in touch with questions.

warwick.ac.uk/fac/cross_fac/mi

Excited to come across the beta of a version of Internet Archive focused on academic journal articles. The version for books is fantastic, so am hopeful about this:

scholar.archive.org/

(but surprised that it apparently starts with 'eighteenth-century journals', rather than 17thC journals... #JournalDesScavans is available on #Gallica; #PhilosophicalTransactions is available from #RoyalSociety)

Galactica sounds like a powerful tool! —“Can summarize academic literature, solve math problems, generate Wiki articles, write scientific code, annotate molecules and proteins, and more.”

galactica.org

Covers everything from mashing bananas, cooking pasta, films on black tea to rheology of Oreos 🍌 😋😊 All you wanted to know about physics of fluids, food, science and education!

aip.scitation.org/doi/full/10.

EMBO/#EMBO Press has two scientific editor positions open, one for The EMBO Journal and the other at Molecular Systems Biology/EMBO Molecular Medicine.
Both jobs are in Heidelberg.

embl.org/jobs/position/EMBO001

embl.org/jobs/position/EMBO001

And we have over 1600 scientists who registered at @beatty 's opencheck.is/scitwitter to preserve the Twitter Science Graph!

New graphic at leonlotter.de/twittergraph/

I updated the code, new layout, no live physics simulation anymore due to performance issues (sorry about that 😬).
In time, I might put together a self-updating online app 🤓.

#Twitter #twitterMigration #science #dataviz # datavis #network #graph
@phdstudents @academicchatter

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Sarcomeres assembling in an immature heart muscle cell videoed through a microscope. A protein that localizes to “Z lines” and their precursors “Z bodies” is shown. If you look carefully you can see the Z bodies concatenating into Z lines. Unless this GiF does not upload. In that case you will just see Z bodies sitting there and I will continue to work on posting here. #cellbiology

Hello there! #introduction

I am a postdoc at Université Laval in Québec working in collaboration with Michelin. My current work is about #ErrorEstimation for #FiniteElements methods. More precisely, I am working on gradient reconstruction for multimaterial problems.

I am also a #fenics user and I am interested in #NonLocalModels and more precisely in the error estimation in the finite element discretization of fractional partial differential equations.
#WelcometoMastodon
#WelcometoMathstodon

We’re looking for in vivo rodent electrophysiologists interested in complex behaviour to come and work in beautiful Glasgow. Advert to appear shortly, but meanwhile, if you’re interested and will be at at #sfn2022, come and find me! (Both postdoc and tenured positions available)a

I wanted to advertise a postdoc position in beautiful Norwich, that is for 3+2 years.
We are looking for a bioinformatician, or someone who wants to become one. In the post we will investigate gut metagenomes using 3rd gen sequencing, deep learning, to investigate pan genomes and microbial adaptation, mostly using human gut time series of various host ailments.

Please retoot or send to interested parties, thanks!
earlham.ac.uk/vacancy/postdoct

Hi #MassSpec #TeamMassSpec, #massspectrometry, quick tips...

➡️ Try posting with hashtags like #massspec AND (this is new ❗ ) ALSO @massspec (our group)

➡️ Search for, then follow, the @massspec group to get related stuff without having to click on hashtags like #massspec. You're effectively subscribed to any posts that mention @massspec then.

➡️ Browse other groups on a.gup.pe/ like @phdlife, @classicalmusic etc or make your own, like @massbank_consortium created by @toschber

SARS-CoV-2 origins 

A strong opinion piece arguing against a lab origin for the -CoV-2 .
The authors provide quite an extensive review of the arguments in the discussion.
I agree that we should focus efforts on studying if we want to prevent further pandemics.

pnas.org/doi/10.1073/pnas.2214

So cool. Look at those ridges
---
RT @AvrahamCooperMD
This is what the inside of an artery actually looks like!

Via Dr. Stephen Bonsib

#MedTwitter

twitter.com/AvrahamCooperMD/st

We are recruiting lecturers in a wide range of topics in Biology including developmental/stem cell biology, #mechanobiology and single cell #omics approaches-come and join us! Deadline: 19th December 2022
More details here: jobs.ac.uk/job/CUV141/lecturer

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