I've collected a set of papers and articles that discuss errors in research due to software errors, in a GitHub repo: https://github.com/danielskatz/errors-due-to-research-software. I think this could be a useful resource for many purposes, and additional contributions are welcome.
RE: https://mastodon.social/@Mastodon/115689198997943088
I’m proud to share my first blog as @Mastodon’s Community Director. Well the first one posted under my name at least 😉
Digital social networking is one of the most important threads in the fabric of our societies. Right now, we’re letting that thread be controlled by social media platforms that let advertisements for scams stay up because they’re profitable, and that use their algorithms to run human research experiments on us without our consent. That’s not the society I want.
“By making the news and truth contingent on advertising budgets we’ve created an environment where any narrative can win, as long as the storyteller is willing to pay. If we allow these conditions to continue, we will leave behind the voices that truly matter; the people and their public institutions. It is critical that those voices not be silenced forever. The promise of the #fediverse is the promise of a better way forward: free from ads and manipulative algorithms built by and for people like you, where #SocialSovereignty is a right and not a privilege.”
In this thread, we asked folks to crowdsource a list of resources so you can find your local representative. Find them, contact them, and tell them this: if you care about a free and just future, and if you care about #DigitalSovereignty, you must leave X and join the fediverse.
Blogs deserve love too (and interoperability) ❤️
I just learned about Rogue Scholar @rogue_scholar, a repository that makes science blogs more findable and citable: full-text search, long-term archiving, DOIs, metadata...
You can register your blog and search ~200 blogs already there.
Learn more about Rogue Scholar here: https://rogue-scholar.org/
And I wrote a bit more at https://www.linkedin.com/posts/alelazic_roguescholar-openscience-openinfrastructure-activity-7403810948412641281-O2TA
I just had to dig this up for something I'm writing, so here's the UN's space debris database (which has mostly turned from "space debris on the ground" to "garbage SpaceX dropped on other countries"): https://www.unoosa.org/oosa/en/treatyimplementation/arra-art-v/unlfd.html
'tis the season again! I've started #adventofcode25, this year using #Python.
I'd love to do a write-up, but it's not possible with a 6 months old at home... still you can grab some [mostly annotated] code here!
Trump Administration Impacts on Early Career Scientists and How To Fight Back https://www.biorxiv.org/content/10.64898/2025.12.03.691733v1?med=mas
@steveroyle @MCDuncanLab I feel this is a problem in many areas and maybe it's me being old and grumpy, but I feel that many students nowadays are not really thinking about what they're doing and why.
I think in part this is due to due to a higher accessibility of science.
We have kits in the lab, we have R and Python packages that make very complicated analysis super easy, which is great, but it also means that you can do those analysis without thinking about what you *actually* are doing... it's a fine line to walk on
What I would like is a citation search tool which divides citing work into a) direct replications b) direct extensions and c) stuff that is just citing for support while they do something completely different. And then I can ignore all of c). Does such a tool exist yet? #AcademicChatter
How do you think the brain "stores" our personal memories? 🧠
This is a question for everyone out there, especially for non-neuroscientists and regardless of education level or familiarity with biology.
I'd just like to hear all your ideas and theories, however crazy they may sound. Be as specific or vague as you like. Please do not look at the answers before giving yours so you are not influenced.
More specifically:
What do you think happens (in the brain) at the time of experiencing something that we will end up remembering?
What do you think happens (in the brain) when, later, we remember that thing?
Boosts welcome but answers even more welcome!
@olibrendel Good question, I'm not sure, but several (all?) I've been involved in retracted papers so they might have a grudge...
@alelazic Oh wow... that sounds borderline scam! I don't remember paying for mine at all... but it was quite a while ago, and universities are much greedier now, I guess!
@ingorohlfing Oh absolutely, agree with you on that. I was just thinking if there were specific advantages of this kind of plot. I know some people struggle with interpreting violin plots so maybe that's one!
@ingorohlfing Interesting, never saw those in the wild! What would be the advantage compared to a violin plot, though?
GrapheneOS has shut down operations in France due to pressure from law enforcement and media, citing risks for privacy projects and demands for a backdoor. Servers are being moved to Toronto and Germany, and developers are barred from entering France https://alternativeto.net/news/2025/11/grapheneos-ceases-operations-in-france-amid-pressure-and-legal-threats-by-the-government/
Pleased to note my Cambridge lecture on how technical approaches to the right of explanation have gone haywire in the LLM era, is already up!
I discuss the spread of legal mandates of explanations of algorithmic decisions but at same time increasing unreliability of explanations offered by "reasoning" LLMs. Chain of Thought not = explainability!!
Many thanks to @CIPIL who um may not be here? And to @jennifercobbe for her v kind invitation!
Tout mon soutien à Elena Mistrello, dessinatrice italienne expulsée sans explications à peine débarquée sur le tarmac de Toulouse, où elle venait présenter sa BD au Festival de @Colomiers31.
Une nouvelle étape grave dans la criminalisation des activistes.
https://www.bubblebd.com/9emeart/bd/actualites/l-autrice-italienne-elena-mistrello-empechee-de-venir-a-un-festival-bd-en-france-par-la-police-nationale
@pjacock interesting reflections! I am wondering how did you define that contribution as AI generated? was the contributor open about it? where there telltale signs? I guess you can't be sure that this was the first AI generated code that went through.
Senior lecturer at Edinburgh University and Zhejiang-Edinburgh Joint Institute (ZJE).
Undergraduate Programme Coordinator, Biomedical Informatics at ZJE.
I teach #imageanalysis & #dataanalysis with #RStats & #python.
My research is focused on how #heterogeneous behaviour in #pituitary (and other) cells shapes their function as a population.
I'm also very interested in #reproducibility and #openscience.